Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX2P48431 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX2P48431 AC018523.1-201ENST00000534211 512 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 EEF1B2P1-201ENST00000567221 672 ntBASIC6.08□□□□□ -1.44
SOX2P48431 ACTG1P15-201ENST00000570019 1063 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AC090286.3-201ENST00000573133 187 ntBASIC6.08□□□□□ -1.44
SOX2P48431 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX2P48431 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX2P48431 RPS28P1-201ENST00000604589 187 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 AC026367.3-201ENST00000619032 590 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AL669830.1-201ENST00000621457 656 ntBASIC6.08□□□□□ -1.44
SOX2P48431 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 AC012100.3-201ENST00000624738 575 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AC097372.4-201ENST00000625025 466 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AL049541.2-201ENST00000626377 555 ntBASIC6.08□□□□□ -1.44
SOX2P48431 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
SOX2P48431 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX2P48431 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SOX2P48431 TNPO1P2-201ENST00000426249 2665 ntBASIC6.08□□□□□ -1.44
SOX2P48431 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX2P48431 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SOX2P48431 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SOX2P48431 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 ZNF812P-201ENST00000457674 1694 ntBASIC6.07□□□□□ -1.44
SOX2P48431 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
SOX2P48431 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 CDY5P-201ENST00000411487 1580 ntBASIC6.07□□□□□ -1.44
SOX2P48431 CDY9P-201ENST00000451397 1580 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AC073342.2-201ENST00000595842 1800 ntBASIC6.07□□□□□ -1.44
SOX2P48431 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SOX2P48431 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX2P48431 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SOX2P48431 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX2P48431 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 RNA5SP396-201ENST00000364834 120 ntBASIC6.07□□□□□ -1.44
SOX2P48431 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SOX2P48431 RPL12P1-201ENST00000374520 498 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AL355143.1-201ENST00000407101 841 ntBASIC6.07□□□□□ -1.44
SOX2P48431 RN7SKP85-201ENST00000411349 318 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX2P48431 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX2P48431 MYO5BP3-201ENST00000431872 1279 ntBASIC6.07□□□□□ -1.44
SOX2P48431 HBBP1-201ENST00000433329 439 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AL161626.1-201ENST00000441480 490 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 MTND2P25-201ENST00000449028 610 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX2P48431 AC018892.2-201ENST00000457656 693 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AC063943.2-201ENST00000495697 534 ntBASIC6.07□□□□□ -1.44
SOX2P48431 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 AC119751.4-201ENST00000507498 357 ntBASIC6.07□□□□□ -1.44
SOX2P48431 HMGN1P15-201ENST00000513870 295 ntBASIC6.07□□□□□ -1.44
SOX2P48431 ADI1P2-201ENST00000514945 429 ntBASIC6.07□□□□□ -1.44
SOX2P48431 MTATP6P9-201ENST00000515039 680 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AP003102.1-201ENST00000525638 661 ntBASIC6.07□□□□□ -1.44
SOX2P48431 OR7E10P-201ENST00000526420 991 ntBASIC6.07□□□□□ -1.44
SOX2P48431 ATP5J2P4-201ENST00000538774 267 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX2P48431 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX2P48431 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX2P48431 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX2P48431 AL135978.1-201ENST00000553618 1266 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AL591767.3-201ENST00000554632 525 ntBASIC6.07□□□□□ -1.44
SOX2P48431 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SOX2P48431 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX2P48431 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SOX2P48431 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX2P48431 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX2P48431 AC133569.1-201ENST00000564327 373 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.07□□□□□ -1.44
SOX2P48431 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.07□□□□□ -1.44
SOX2P48431 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX2P48431 AL671309.1-201ENST00000603750 544 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AC073111.2-201ENST00000605657 1075 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AC084036.1-201ENST00000609190 508 ntBASIC6.07□□□□□ -1.44
SOX2P48431 AC119674.1-220ENST00000641502 1048 ntBASIC6.07□□□□□ -1.44
SOX2P48431 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX2P48431 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.07□□□□□ -1.44
SOX2P48431 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.07□□□□□ -1.44
SOX2P48431 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 AL356361.1-201ENST00000400943 1459 ntBASIC6.07□□□□□ -1.44
SOX2P48431 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.07□□□□□ -1.44
SOX2P48431 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SOX2P48431 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms