Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 RNA5SP308-201ENST00000362532 115 ntBASIC7.6□□□□□ -1.19
CIITAP33076 RNA5SP140-201ENST00000364524 92 ntBASIC7.6□□□□□ -1.19
CIITAP33076 SNORD94-201ENST00000386037 137 ntBASIC7.6□□□□□ -1.19
CIITAP33076 AL359694.1-201ENST00000403247 604 ntBASIC7.6□□□□□ -1.19
CIITAP33076 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.6□□□□□ -1.19
CIITAP33076 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.6□□□□□ -1.19
CIITAP33076 AC064862.5-201ENST00000440618 334 ntBASIC7.6□□□□□ -1.19
CIITAP33076 CEACAMP11-201ENST00000455211 583 ntBASIC7.6□□□□□ -1.19
CIITAP33076 RN7SL37P-201ENST00000490461 307 ntBASIC7.6□□□□□ -1.19
CIITAP33076 MRPL57P6-201ENST00000506570 309 ntBASIC7.6□□□□□ -1.19
CIITAP33076 AC139713.1-202ENST00000512366 460 ntBASIC7.6□□□□□ -1.19
CIITAP33076 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.6□□□□□ -1.19
CIITAP33076 AC005519.1-201ENST00000554490 601 ntBASIC7.6□□□□□ -1.19
CIITAP33076 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.6□□□□□ -1.19
CIITAP33076 AP003115.1-201ENST00000569849 463 ntBASIC7.6□□□□□ -1.19
CIITAP33076 ARGFXP2-201ENST00000579304 949 ntBASIC7.6□□□□□ -1.19
CIITAP33076 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.6□□□□□ -1.19
CIITAP33076 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.6□□□□□ -1.19
CIITAP33076 AC036176.3-201ENST00000602456 418 ntBASIC7.6□□□□□ -1.19
CIITAP33076 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.6□□□□□ -1.19
CIITAP33076 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.6□□□□□ -1.19
CIITAP33076 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.6□□□□□ -1.19
CIITAP33076 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.6□□□□□ -1.19
CIITAP33076 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.6□□□□□ -1.19
CIITAP33076 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 AC067942.1-201ENST00000488045 1493 ntBASIC7.6□□□□□ -1.19
CIITAP33076 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CIITAP33076 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CIITAP33076 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CIITAP33076 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
CIITAP33076 AC074141.1-201ENST00000588129 2995 ntBASIC7.59□□□□□ -1.19
CIITAP33076 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
CIITAP33076 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.59□□□□□ -1.19
CIITAP33076 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 AC119674.1-204ENST00000641348 1343 ntBASIC7.59□□□□□ -1.19
CIITAP33076 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
CIITAP33076 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 MIR551B-201ENST00000384984 96 ntBASIC7.59□□□□□ -1.19
CIITAP33076 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CIITAP33076 MIR541-201ENST00000401360 84 ntBASIC7.59□□□□□ -1.19
CIITAP33076 RPL12P23-201ENST00000405880 490 ntBASIC7.59□□□□□ -1.19
CIITAP33076 RNU6-233P-201ENST00000410845 141 ntBASIC7.59□□□□□ -1.19
CIITAP33076 RN7SKP205-201ENST00000410999 307 ntBASIC7.59□□□□□ -1.19
CIITAP33076 RN7SKP296-201ENST00000411185 341 ntBASIC7.59□□□□□ -1.19
CIITAP33076 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.59□□□□□ -1.19
CIITAP33076 RPS7P12-201ENST00000422385 582 ntBASIC7.59□□□□□ -1.19
CIITAP33076 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC7.59□□□□□ -1.19
CIITAP33076 UBBP5-201ENST00000446970 266 ntBASIC7.59□□□□□ -1.19
CIITAP33076 AKR1D1P1-201ENST00000457236 936 ntBASIC7.59□□□□□ -1.19
CIITAP33076 AC074386.1-206ENST00000487102 761 ntBASIC7.59□□□□□ -1.19
CIITAP33076 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC7.59□□□□□ -1.19
CIITAP33076 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.59□□□□□ -1.19
CIITAP33076 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC7.59□□□□□ -1.19
CIITAP33076 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.59□□□□□ -1.19
CIITAP33076 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC7.59□□□□□ -1.19
CIITAP33076 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.59□□□□□ -1.19
CIITAP33076 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.59□□□□□ -1.19
CIITAP33076 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.59□□□□□ -1.19
CIITAP33076 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.59□□□□□ -1.19
CIITAP33076 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.59□□□□□ -1.19
CIITAP33076 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.59□□□□□ -1.19
CIITAP33076 AC130448.2-201ENST00000624082 374 ntBASIC7.59□□□□□ -1.19
CIITAP33076 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.59□□□□□ -1.19
CIITAP33076 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CIITAP33076 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.59□□□□□ -1.2
CIITAP33076 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
CIITAP33076 CTAGE11P-201ENST00000451540 2353 ntBASIC7.59□□□□□ -1.2
CIITAP33076 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
CIITAP33076 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.59□□□□□ -1.2
CIITAP33076 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CIITAP33076 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CIITAP33076 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.58□□□□□ -1.2
CIITAP33076 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
CIITAP33076 NEK2P4-201ENST00000425793 1329 ntBASIC7.58□□□□□ -1.2
CIITAP33076 AL512310.3-201ENST00000547023 1335 ntBASIC7.58□□□□□ -1.2
CIITAP33076 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms