Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CDH3P22223 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CDH3P22223 SUMO2P13-201ENST00000403109 272 ntBASIC6.75□□□□□ -1.33
CDH3P22223 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH3P22223 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH3P22223 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.75□□□□□ -1.33
CDH3P22223 RPL17P17-201ENST00000419491 557 ntBASIC6.75□□□□□ -1.33
CDH3P22223 TRGV5P-201ENST00000419915 354 ntBASIC6.75□□□□□ -1.33
CDH3P22223 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH3P22223 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 MYL6P3-201ENST00000436904 432 ntBASIC6.75□□□□□ -1.33
CDH3P22223 AC010878.1-201ENST00000456500 1047 ntBASIC6.75□□□□□ -1.33
CDH3P22223 RPL34P34-201ENST00000465389 354 ntBASIC6.75□□□□□ -1.33
CDH3P22223 AC022730.1-201ENST00000473114 568 ntBASIC6.75□□□□□ -1.33
CDH3P22223 RN7SL267P-201ENST00000485107 261 ntBASIC6.75□□□□□ -1.33
CDH3P22223 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.75□□□□□ -1.33
CDH3P22223 OR5D2P-201ENST00000524390 911 ntBASIC6.75□□□□□ -1.33
CDH3P22223 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH3P22223 AL049840.6-201ENST00000604583 345 ntBASIC6.75□□□□□ -1.33
CDH3P22223 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.75□□□□□ -1.33
CDH3P22223 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CDH3P22223 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CDH3P22223 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.74□□□□□ -1.33
CDH3P22223 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.74□□□□□ -1.33
CDH3P22223 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CDH3P22223 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH3P22223 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.74□□□□□ -1.33
CDH3P22223 RNA5SP172-201ENST00000365061 118 ntBASIC6.74□□□□□ -1.33
CDH3P22223 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.74□□□□□ -1.33
CDH3P22223 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.74□□□□□ -1.33
CDH3P22223 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.74□□□□□ -1.33
CDH3P22223 AL672212.1-201ENST00000422246 400 ntBASIC6.74□□□□□ -1.33
CDH3P22223 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH3P22223 AC018804.1-201ENST00000430381 618 ntBASIC6.74□□□□□ -1.33
CDH3P22223 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH3P22223 MRPS21P3-201ENST00000436696 262 ntBASIC6.74□□□□□ -1.33
CDH3P22223 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.74□□□□□ -1.33
CDH3P22223 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.74□□□□□ -1.33
CDH3P22223 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH3P22223 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.74□□□□□ -1.33
CDH3P22223 AP000805.1-201ENST00000471604 784 ntBASIC6.74□□□□□ -1.33
CDH3P22223 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.74□□□□□ -1.33
CDH3P22223 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.74□□□□□ -1.33
CDH3P22223 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.74□□□□□ -1.33
CDH3P22223 RN7SKP11-201ENST00000517018 287 ntBASIC6.74□□□□□ -1.33
CDH3P22223 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.74□□□□□ -1.33
CDH3P22223 IGLVV-66-201ENST00000523818 341 ntBASIC6.74□□□□□ -1.33
CDH3P22223 EIF4A3P1-201ENST00000578499 647 ntBASIC6.74□□□□□ -1.33
CDH3P22223 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.74□□□□□ -1.33
CDH3P22223 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.74□□□□□ -1.33
CDH3P22223 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH3P22223 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH3P22223 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 AC009220.2-201ENST00000489759 1751 ntBASIC6.74□□□□□ -1.33
CDH3P22223 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.74□□□□□ -1.33
CDH3P22223 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 AC090220.1-201ENST00000593078 1699 ntBASIC6.74□□□□□ -1.33
CDH3P22223 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.74□□□□□ -1.33
CDH3P22223 AL359263.1-201ENST00000441188 2796 ntBASIC6.74□□□□□ -1.33
CDH3P22223 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDH3P22223 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
CDH3P22223 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH3P22223 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH3P22223 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDH3P22223 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.73□□□□□ -1.33
CDH3P22223 TTC41P-205ENST00000551270 3963 ntBASIC6.73□□□□□ -1.33
CDH3P22223 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CDH3P22223 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.73□□□□□ -1.33
CDH3P22223 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDH3P22223 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CDH3P22223 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CDH3P22223 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.73□□□□□ -1.33
CDH3P22223 RNA5SP176-201ENST00000390956 110 ntBASIC6.73□□□□□ -1.33
CDH3P22223 RN7SKP148-201ENST00000410179 275 ntBASIC6.73□□□□□ -1.33
CDH3P22223 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.73□□□□□ -1.33
CDH3P22223 GSTA6P-201ENST00000424144 582 ntBASIC6.73□□□□□ -1.33
CDH3P22223 E2F6P1-201ENST00000428850 745 ntBASIC6.73□□□□□ -1.33
CDH3P22223 AC091390.2-201ENST00000432573 374 ntBASIC6.73□□□□□ -1.33
CDH3P22223 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms