Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
LIG1P18858 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC8.39□□□□□ -1.07
LIG1P18858 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.39□□□□□ -1.07
LIG1P18858 AL593856.1-201ENST00000419949 805 ntBASIC8.39□□□□□ -1.07
LIG1P18858 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC8.39□□□□□ -1.07
LIG1P18858 AC092865.3-201ENST00000425390 1026 ntBASIC8.39□□□□□ -1.07
LIG1P18858 RPP40P1-201ENST00000426762 456 ntBASIC8.39□□□□□ -1.07
LIG1P18858 RPSAP62-201ENST00000432596 833 ntBASIC8.39□□□□□ -1.07
LIG1P18858 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC8.39□□□□□ -1.07
LIG1P18858 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC8.39□□□□□ -1.07
LIG1P18858 SS18L2P1-201ENST00000445923 213 ntBASIC8.39□□□□□ -1.07
LIG1P18858 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.39□□□□□ -1.07
LIG1P18858 EIF2S2P2-201ENST00000447161 982 ntBASIC8.39□□□□□ -1.07
LIG1P18858 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC8.39□□□□□ -1.07
LIG1P18858 AC016489.1-201ENST00000461109 375 ntBASIC8.39□□□□□ -1.07
LIG1P18858 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC8.39□□□□□ -1.07
LIG1P18858 AC084878.1-201ENST00000480555 648 ntBASIC8.39□□□□□ -1.07
LIG1P18858 RN7SL705P-201ENST00000481678 294 ntBASIC8.39□□□□□ -1.07
LIG1P18858 AC066616.1-201ENST00000486795 413 ntBASIC8.39□□□□□ -1.07
LIG1P18858 PDPN-205ENST00000487038 607 ntTSL 2 BASIC8.39□□□□□ -1.07
LIG1P18858 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC8.39□□□□□ -1.07
LIG1P18858 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC8.39□□□□□ -1.07
LIG1P18858 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LIG1P18858 AC008496.1-201ENST00000509131 295 ntBASIC8.39□□□□□ -1.07
LIG1P18858 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.39□□□□□ -1.07
LIG1P18858 MTCO3P27-201ENST00000514397 196 ntBASIC8.39□□□□□ -1.07
LIG1P18858 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC8.39□□□□□ -1.07
LIG1P18858 AC104115.2-201ENST00000523026 687 ntBASIC8.39□□□□□ -1.07
LIG1P18858 EMP1-206ENST00000537612 505 ntTSL 3 BASIC8.39□□□□□ -1.07
LIG1P18858 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC8.39□□□□□ -1.07
LIG1P18858 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC8.39□□□□□ -1.07
LIG1P18858 DIMT1P1-201ENST00000603970 763 ntBASIC8.39□□□□□ -1.07
LIG1P18858 AC092954.1-201ENST00000609121 445 ntBASIC8.39□□□□□ -1.07
LIG1P18858 AC135050.6-202ENST00000613584 392 ntBASIC8.39□□□□□ -1.07
LIG1P18858 BX005195.1-201ENST00000618097 1198 ntBASIC8.39□□□□□ -1.07
LIG1P18858 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
LIG1P18858 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC8.39□□□□□ -1.07
LIG1P18858 AC022743.1-201ENST00000624990 664 ntBASIC8.39□□□□□ -1.07
LIG1P18858 AC017104.5-201ENST00000637647 639 ntBASIC8.39□□□□□ -1.07
LIG1P18858 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LIG1P18858 CDY7P-201ENST00000429883 1604 ntBASIC8.39□□□□□ -1.07
LIG1P18858 AC079178.2-201ENST00000439323 1624 ntBASIC8.39□□□□□ -1.07
LIG1P18858 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LIG1P18858 IARS-205ENST00000443024 4341 ntTSL 5 BASIC8.39□□□□□ -1.07
LIG1P18858 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LIG1P18858 CAST-202ENST00000325674 3356 ntTSL 5 BASIC8.39□□□□□ -1.07
LIG1P18858 AC120338.1-201ENST00000625074 1541 ntBASIC8.39□□□□□ -1.07
LIG1P18858 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
LIG1P18858 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
LIG1P18858 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.39□□□□□ -1.07
LIG1P18858 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.38□□□□□ -1.07
LIG1P18858 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.38□□□□□ -1.07
LIG1P18858 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 PTMAP8-201ENST00000397729 342 ntBASIC8.38□□□□□ -1.07
LIG1P18858 MIR1204-201ENST00000408388 67 ntBASIC8.38□□□□□ -1.07
LIG1P18858 MORN2-202ENST00000409077 465 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC8.38□□□□□ -1.07
LIG1P18858 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.38□□□□□ -1.07
LIG1P18858 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.38□□□□□ -1.07
LIG1P18858 AC092570.3-201ENST00000420113 693 ntBASIC8.38□□□□□ -1.07
LIG1P18858 SNX18P3-201ENST00000424993 835 ntBASIC8.38□□□□□ -1.07
LIG1P18858 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
LIG1P18858 SNX18P14-201ENST00000429308 574 ntBASIC8.38□□□□□ -1.07
LIG1P18858 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 RPS6P15-201ENST00000431996 751 ntBASIC8.38□□□□□ -1.07
LIG1P18858 TRBV26OR9-2-201ENST00000432077 293 ntBASIC8.38□□□□□ -1.07
LIG1P18858 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC8.38□□□□□ -1.07
LIG1P18858 MOB1AP2-201ENST00000446060 614 ntBASIC8.38□□□□□ -1.07
LIG1P18858 RN7SL325P-201ENST00000460434 283 ntBASIC8.38□□□□□ -1.07
LIG1P18858 RN7SL308P-201ENST00000464971 297 ntBASIC8.38□□□□□ -1.07
LIG1P18858 RN7SL549P-201ENST00000478997 282 ntBASIC8.38□□□□□ -1.07
LIG1P18858 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC8.38□□□□□ -1.07
LIG1P18858 OR7E83P-201ENST00000511021 970 ntBASIC8.38□□□□□ -1.07
LIG1P18858 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC8.38□□□□□ -1.07
LIG1P18858 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
LIG1P18858 RNU6-1102P-201ENST00000516149 96 ntBASIC8.38□□□□□ -1.07
LIG1P18858 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC8.38□□□□□ -1.07
LIG1P18858 AC084851.2-201ENST00000530377 364 ntBASIC8.38□□□□□ -1.07
LIG1P18858 OR7E96P-201ENST00000530816 976 ntBASIC8.38□□□□□ -1.07
LIG1P18858 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
LIG1P18858 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
LIG1P18858 AC135626.1-201ENST00000556983 435 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms