Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TPM1P09493 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
TPM1P09493 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM1P09493 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM1P09493 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM1P09493 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM1P09493 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM1P09493 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM1P09493 SLC25A5P7-201ENST00000406156 896 ntBASIC7.37□□□□□ -1.23
TPM1P09493 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM1P09493 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM1P09493 AC092066.1-201ENST00000425131 317 ntBASIC7.37□□□□□ -1.23
TPM1P09493 DNAJC19P5-201ENST00000443295 316 ntBASIC7.37□□□□□ -1.23
TPM1P09493 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM1P09493 MGAT2P1-201ENST00000449718 797 ntBASIC7.37□□□□□ -1.23
TPM1P09493 RN7SL263P-201ENST00000467969 290 ntBASIC7.37□□□□□ -1.23
TPM1P09493 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM1P09493 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM1P09493 AC117383.2-201ENST00000514722 322 ntBASIC7.37□□□□□ -1.23
TPM1P09493 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM1P09493 AC090115.2-201ENST00000548060 883 ntBASIC7.37□□□□□ -1.23
TPM1P09493 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM1P09493 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM1P09493 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM1P09493 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.37□□□□□ -1.23
TPM1P09493 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM1P09493 AC005495.1-201ENST00000586611 1211 ntBASIC7.37□□□□□ -1.23
TPM1P09493 SNRPCP20-201ENST00000588011 210 ntBASIC7.37□□□□□ -1.23
TPM1P09493 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
TPM1P09493 AC005393.1-201ENST00000617916 584 ntBASIC7.37□□□□□ -1.23
TPM1P09493 TCL6_3.1-201ENST00000619064 137 ntBASIC7.37□□□□□ -1.23
TPM1P09493 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM1P09493 AC133485.6-201ENST00000624045 688 ntBASIC7.37□□□□□ -1.23
TPM1P09493 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM1P09493 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM1P09493 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM1P09493 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM1P09493 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TPM1P09493 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TPM1P09493 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM1P09493 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.37□□□□□ -1.23
TPM1P09493 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.37□□□□□ -1.23
TPM1P09493 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM1P09493 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
TPM1P09493 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM1P09493 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM1P09493 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.36□□□□□ -1.23
TPM1P09493 DLEU2L-201ENST00000371086 3555 ntBASIC7.36□□□□□ -1.23
TPM1P09493 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
TPM1P09493 RN7SKP118-201ENST00000364331 330 ntBASIC7.36□□□□□ -1.23
TPM1P09493 SNORA70.5-201ENST00000365519 135 ntBASIC7.36□□□□□ -1.23
TPM1P09493 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
TPM1P09493 AL451046.1-201ENST00000406097 534 ntBASIC7.36□□□□□ -1.23
TPM1P09493 AL049697.3-201ENST00000406493 982 ntBASIC7.36□□□□□ -1.23
TPM1P09493 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM1P09493 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM1P09493 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM1P09493 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.36□□□□□ -1.23
TPM1P09493 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM1P09493 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC7.36□□□□□ -1.23
TPM1P09493 NMNAT1P3-201ENST00000457517 888 ntBASIC7.36□□□□□ -1.23
TPM1P09493 RN7SL308P-201ENST00000464971 297 ntBASIC7.36□□□□□ -1.23
TPM1P09493 RPL7AP56-201ENST00000476420 791 ntBASIC7.36□□□□□ -1.23
TPM1P09493 MRPL49P1-201ENST00000505951 535 ntBASIC7.36□□□□□ -1.23
TPM1P09493 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM1P09493 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM1P09493 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.36□□□□□ -1.23
TPM1P09493 RN7SL270P-201ENST00000579643 281 ntBASIC7.36□□□□□ -1.23
TPM1P09493 CTSLP2-201ENST00000580501 394 ntBASIC7.36□□□□□ -1.23
TPM1P09493 BOLA2P1-201ENST00000584794 232 ntBASIC7.36□□□□□ -1.23
TPM1P09493 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.36□□□□□ -1.23
TPM1P09493 AC006116.6-201ENST00000593258 1103 ntBASIC7.36□□□□□ -1.23
TPM1P09493 AC004241.2-201ENST00000614562 444 ntBASIC7.36□□□□□ -1.23
TPM1P09493 AL161420.1-201ENST00000619393 264 ntBASIC7.36□□□□□ -1.23
TPM1P09493 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.36□□□□□ -1.23
TPM1P09493 AC087893.2-201ENST00000623272 255 ntBASIC7.36□□□□□ -1.23
TPM1P09493 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.36□□□□□ -1.23
TPM1P09493 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.36□□□□□ -1.23
TPM1P09493 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.36□□□□□ -1.23
TPM1P09493 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
TPM1P09493 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.36□□□□□ -1.23
TPM1P09493 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TPM1P09493 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
TPM1P09493 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms