Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.14□□□□□ -1.43
ZIC3O60481 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.14□□□□□ -1.43
ZIC3O60481 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZIC3O60481 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 AC009948.3-201ENST00000603415 1798 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
ZIC3O60481 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.13□□□□□ -1.43
ZIC3O60481 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
ZIC3O60481 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 RACGAP1P-201ENST00000550663 1879 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.13□□□□□ -1.43
ZIC3O60481 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
ZIC3O60481 MARK2P4-201ENST00000503381 2380 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ZIC3O60481 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.13□□□□□ -1.43
ZIC3O60481 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ZIC3O60481 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ZIC3O60481 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.13□□□□□ -1.43
ZIC3O60481 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 AL590635.1-201ENST00000406314 586 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.13□□□□□ -1.43
ZIC3O60481 MTND2P12-201ENST00000417560 1252 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.13□□□□□ -1.43
ZIC3O60481 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.13□□□□□ -1.43
ZIC3O60481 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.13□□□□□ -1.43
ZIC3O60481 PAICSP2-201ENST00000429118 1150 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 WDR82P2-201ENST00000444540 928 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ZIC3O60481 AC022080.2-201ENST00000452932 533 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.13□□□□□ -1.43
ZIC3O60481 TAAR4P-201ENST00000454843 1039 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 RN7SL382P-201ENST00000482631 282 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 RPL23AP80-201ENST00000495605 424 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 AC095057.1-201ENST00000507583 168 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.13□□□□□ -1.43
ZIC3O60481 CCNHP1-201ENST00000513311 678 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 AC011352.2-201ENST00000514574 1016 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.13□□□□□ -1.43
ZIC3O60481 RNU6-964P-201ENST00000516524 69 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 RNU4-18P-201ENST00000516751 149 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 SNRPCP6-201ENST00000528310 210 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.13□□□□□ -1.43
ZIC3O60481 CHEK2P2-201ENST00000554701 672 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 AC067805.1-201ENST00000559344 470 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 OR4C49P-201ENST00000563891 900 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.13□□□□□ -1.43
ZIC3O60481 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.13□□□□□ -1.43
ZIC3O60481 DIMT1P1-201ENST00000603970 763 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 AC091167.5-201ENST00000605689 894 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 AC091768.1-201ENST00000609258 930 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.13□□□□□ -1.43
ZIC3O60481 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.13□□□□□ -1.43
ZIC3O60481 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.13□□□□□ -1.43
ZIC3O60481 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.13□□□□□ -1.43
ZIC3O60481 AC092111.1-201ENST00000618256 3358 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC6.13□□□□□ -1.43
ZIC3O60481 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
ZIC3O60481 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
ZIC3O60481 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 Z97989.1-201ENST00000531702 2421 ntBASIC6.13□□□□□ -1.43
ZIC3O60481 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZIC3O60481 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.12□□□□□ -1.43
ZIC3O60481 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 AC020658.2-201ENST00000559030 4020 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ZIC3O60481 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 TET1P1-201ENST00000426627 2301 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.12□□□□□ -1.43
ZIC3O60481 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ZIC3O60481 AC239367.3-201ENST00000428996 814 ntBASIC6.12□□□□□ -1.43
ZIC3O60481 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.12□□□□□ -1.43
ZIC3O60481 PSMD8P1-201ENST00000436275 769 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms