Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB7Q9Y5E2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHB7Q9Y5E2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB7Q9Y5E2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB7Q9Y5E2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PCDHB7Q9Y5E2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PCDHB7Q9Y5E2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB7Q9Y5E2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDHB7Q9Y5E2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.48■■□□□ 1.03
PCDHB7Q9Y5E2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 AL390955.1-201ENST00000428694 934 ntBASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 FITM1-202ENST00000559294 800 ntBASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 AF106564.1-201ENST00000607058 2553 ntBASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB7Q9Y5E2 KRT16P6-202ENST00000425692 1426 ntBASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 AL031985.4-201ENST00000642138 673 ntBASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
PCDHB7Q9Y5E2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHB7Q9Y5E2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHB7Q9Y5E2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 AC006128.1-201ENST00000624704 1661 ntBASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 AC005521.1-201ENST00000393351 872 ntBASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 CYP2D8P-201ENST00000433633 1490 ntBASIC21.45■■□□□ 1.02
PCDHB7Q9Y5E2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 AL049597.2-201ENST00000565575 961 ntBASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 AL445228.2-201ENST00000605589 952 ntBASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 KRT18P22-201ENST00000402024 1347 ntBASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB7Q9Y5E2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 C1QL1P1-201ENST00000568105 661 ntBASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 AC116351.2-201ENST00000606540 1585 ntBASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHB7Q9Y5E2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms