Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 DUSP5P2-201ENST00000426873 1033 ntBASIC19.74■□□□□ 0.75
TSR3Q9UJK0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 C2orf69P4-201ENST00000565394 541 ntBASIC19.74■□□□□ 0.75
TSR3Q9UJK0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TSR3Q9UJK0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 AL355802.2-201ENST00000402069 882 ntBASIC19.73■□□□□ 0.75
TSR3Q9UJK0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TSR3Q9UJK0 TCF3P1-201ENST00000423021 1937 ntBASIC19.72■□□□□ 0.75
TSR3Q9UJK0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 HLA-L-209ENST00000420110 1011 ntBASIC19.72■□□□□ 0.75
TSR3Q9UJK0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TSR3Q9UJK0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 AL691432.2-201ENST00000607222 2038 ntBASIC19.71■□□□□ 0.75
TSR3Q9UJK0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 AC104771.1-201ENST00000603335 964 ntBASIC19.71■□□□□ 0.75
TSR3Q9UJK0 PTBP1P-201ENST00000554374 1601 ntBASIC19.71■□□□□ 0.75
TSR3Q9UJK0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.71■□□□□ 0.75
TSR3Q9UJK0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TSR3Q9UJK0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TSR3Q9UJK0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TSR3Q9UJK0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TSR3Q9UJK0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TSR3Q9UJK0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
TSR3Q9UJK0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TSR3Q9UJK0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.7■□□□□ 0.74
TSR3Q9UJK0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TSR3Q9UJK0 BX119927.1-201ENST00000636596 1552 ntBASIC19.7■□□□□ 0.74
TSR3Q9UJK0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TSR3Q9UJK0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.69■□□□□ 0.74
TSR3Q9UJK0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TSR3Q9UJK0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TSR3Q9UJK0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TSR3Q9UJK0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms