Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.62■□□□□ 0.73
CFAP54Q96N23 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CFAP54Q96N23 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.61■□□□□ 0.73
CFAP54Q96N23 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.61■□□□□ 0.73
CFAP54Q96N23 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.61■□□□□ 0.73
CFAP54Q96N23 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CFAP54Q96N23 DGCR10-201ENST00000609839 495 ntBASIC19.61■□□□□ 0.73
CFAP54Q96N23 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CFAP54Q96N23 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.61■□□□□ 0.73
CFAP54Q96N23 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP54Q96N23 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.61■□□□□ 0.73
CFAP54Q96N23 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP54Q96N23 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.61■□□□□ 0.73
CFAP54Q96N23 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP54Q96N23 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP54Q96N23 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.61■□□□□ 0.73
CFAP54Q96N23 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP54Q96N23 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
CFAP54Q96N23 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.6■□□□□ 0.73
CFAP54Q96N23 B3GAT3P1-201ENST00000471720 806 ntBASIC19.6■□□□□ 0.73
CFAP54Q96N23 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.6■□□□□ 0.73
CFAP54Q96N23 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CFAP54Q96N23 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP54Q96N23 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP54Q96N23 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.6■□□□□ 0.73
CFAP54Q96N23 EP400NL-214ENST00000641289 2402 ntBASIC19.6■□□□□ 0.73
CFAP54Q96N23 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP54Q96N23 AC097488.1-201ENST00000507834 756 ntBASIC19.6■□□□□ 0.73
CFAP54Q96N23 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.6■□□□□ 0.73
CFAP54Q96N23 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP54Q96N23 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CFAP54Q96N23 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CFAP54Q96N23 ATP5G2P1-201ENST00000433580 426 ntBASIC19.6■□□□□ 0.73
CFAP54Q96N23 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.6■□□□□ 0.73
CFAP54Q96N23 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CFAP54Q96N23 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP54Q96N23 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP54Q96N23 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CFAP54Q96N23 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.59■□□□□ 0.73
CFAP54Q96N23 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.59■□□□□ 0.73
CFAP54Q96N23 AC092119.3-201ENST00000612618 583 ntBASIC19.59■□□□□ 0.73
CFAP54Q96N23 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.59■□□□□ 0.73
CFAP54Q96N23 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CFAP54Q96N23 FSCN1P1-201ENST00000568912 1481 ntBASIC19.59■□□□□ 0.73
CFAP54Q96N23 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP54Q96N23 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.59■□□□□ 0.73
CFAP54Q96N23 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.59■□□□□ 0.73
CFAP54Q96N23 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP54Q96N23 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.59■□□□□ 0.73
CFAP54Q96N23 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.59■□□□□ 0.73
CFAP54Q96N23 MIR3652-201ENST00000579335 131 ntBASIC19.59■□□□□ 0.73
CFAP54Q96N23 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP54Q96N23 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP54Q96N23 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CFAP54Q96N23 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP54Q96N23 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP54Q96N23 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP54Q96N23 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP54Q96N23 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP54Q96N23 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CFAP54Q96N23 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.58■□□□□ 0.73
CFAP54Q96N23 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP54Q96N23 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CFAP54Q96N23 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
CFAP54Q96N23 EMBP1-201ENST00000458200 901 ntBASIC19.58■□□□□ 0.72
CFAP54Q96N23 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
CFAP54Q96N23 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.58■□□□□ 0.72
CFAP54Q96N23 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.58■□□□□ 0.72
CFAP54Q96N23 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.58■□□□□ 0.72
CFAP54Q96N23 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CFAP54Q96N23 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CFAP54Q96N23 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.58■□□□□ 0.72
CFAP54Q96N23 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP54Q96N23 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 NPAP1P7-201ENST00000613027 823 ntBASIC19.57■□□□□ 0.72
CFAP54Q96N23 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP54Q96N23 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP54Q96N23 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP54Q96N23 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP54Q96N23 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP54Q96N23 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP54Q96N23 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 FAAHP1-202ENST00000446499 1238 ntBASIC19.57■□□□□ 0.72
CFAP54Q96N23 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CFAP54Q96N23 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CFAP54Q96N23 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.56■□□□□ 0.72
CFAP54Q96N23 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP54Q96N23 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CFAP54Q96N23 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.56■□□□□ 0.72
CFAP54Q96N23 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CFAP54Q96N23 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms