Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3KBP1Q96B97 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.67■□□□□ 0.74
SH3KBP1Q96B97 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3KBP1Q96B97 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3KBP1Q96B97 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3KBP1Q96B97 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3KBP1Q96B97 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3KBP1Q96B97 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.67■□□□□ 0.74
SH3KBP1Q96B97 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 AL158047.1-201ENST00000445918 881 ntBASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.66■□□□□ 0.74
SH3KBP1Q96B97 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 AP005212.1-201ENST00000581547 1997 ntBASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 AC092720.2-201ENST00000602388 1665 ntBASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3KBP1Q96B97 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH3KBP1Q96B97 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH3KBP1Q96B97 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH3KBP1Q96B97 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH3KBP1Q96B97 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.64■□□□□ 0.74
SH3KBP1Q96B97 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SH3KBP1Q96B97 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 RPS2P52-201ENST00000469610 820 ntBASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SH3KBP1Q96B97 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3KBP1Q96B97 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms