Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.63■□□□□ 0.73
USP7Q93009 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.63■□□□□ 0.73
USP7Q93009 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.63■□□□□ 0.73
USP7Q93009 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.63■□□□□ 0.73
USP7Q93009 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
USP7Q93009 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
USP7Q93009 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP7Q93009 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.63■□□□□ 0.73
USP7Q93009 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
USP7Q93009 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
USP7Q93009 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
USP7Q93009 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
USP7Q93009 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.62■□□□□ 0.73
USP7Q93009 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.62■□□□□ 0.73
USP7Q93009 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.62■□□□□ 0.73
USP7Q93009 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.62■□□□□ 0.73
USP7Q93009 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.62■□□□□ 0.73
USP7Q93009 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.62■□□□□ 0.73
USP7Q93009 SOX15-203ENST00000570788 1093 ntBASIC19.62■□□□□ 0.73
USP7Q93009 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.62■□□□□ 0.73
USP7Q93009 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.62■□□□□ 0.73
USP7Q93009 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.62■□□□□ 0.73
USP7Q93009 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.62■□□□□ 0.73
USP7Q93009 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP7Q93009 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 CYP21A1P-202ENST00000354927 1481 ntBASIC19.61■□□□□ 0.73
USP7Q93009 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USP7Q93009 KRT8P36-201ENST00000489121 1440 ntBASIC19.61■□□□□ 0.73
USP7Q93009 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
USP7Q93009 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.61■□□□□ 0.73
USP7Q93009 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.61■□□□□ 0.73
USP7Q93009 RN7SL471P-201ENST00000580476 299 ntBASIC19.61■□□□□ 0.73
USP7Q93009 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.61■□□□□ 0.73
USP7Q93009 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.61■□□□□ 0.73
USP7Q93009 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
USP7Q93009 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.61■□□□□ 0.73
USP7Q93009 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.61■□□□□ 0.73
USP7Q93009 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP7Q93009 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
USP7Q93009 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.6■□□□□ 0.73
USP7Q93009 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.6■□□□□ 0.73
USP7Q93009 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.6■□□□□ 0.73
USP7Q93009 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 MIR718-201ENST00000390190 70 ntBASIC19.6■□□□□ 0.73
USP7Q93009 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.6■□□□□ 0.73
USP7Q93009 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.6■□□□□ 0.73
USP7Q93009 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP7Q93009 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.6■□□□□ 0.73
USP7Q93009 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.59■□□□□ 0.73
USP7Q93009 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
USP7Q93009 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP7Q93009 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP7Q93009 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.59■□□□□ 0.73
USP7Q93009 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
USP7Q93009 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP7Q93009 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.59■□□□□ 0.73
USP7Q93009 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
USP7Q93009 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
USP7Q93009 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.59■□□□□ 0.73
USP7Q93009 AC112907.3-201ENST00000577781 2400 ntBASIC19.59■□□□□ 0.73
USP7Q93009 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.59■□□□□ 0.73
USP7Q93009 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP7Q93009 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
USP7Q93009 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
USP7Q93009 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.59■□□□□ 0.73
USP7Q93009 AC233263.1-201ENST00000578059 224 ntBASIC19.59■□□□□ 0.73
USP7Q93009 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.59■□□□□ 0.73
USP7Q93009 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms