Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX1Q92499 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.21■□□□□ 0.99
DDX1Q92499 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX1Q92499 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX1Q92499 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX1Q92499 KRT16P6-202ENST00000425692 1426 ntBASIC21.21■□□□□ 0.99
DDX1Q92499 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX1Q92499 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX1Q92499 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX1Q92499 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX1Q92499 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX1Q92499 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX1Q92499 AC009237.14-201ENST00000609975 1594 ntBASIC21.2■□□□□ 0.98
DDX1Q92499 HLA-G-202ENST00000376815 851 ntBASIC21.2■□□□□ 0.98
DDX1Q92499 HLA-G-203ENST00000376818 1127 ntBASIC21.2■□□□□ 0.98
DDX1Q92499 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX1Q92499 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX1Q92499 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX1Q92499 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX1Q92499 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX1Q92499 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX1Q92499 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX1Q92499 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX1Q92499 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX1Q92499 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX1Q92499 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX1Q92499 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX1Q92499 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX1Q92499 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX1Q92499 AL158211.5-201ENST00000623583 2518 ntBASIC21.19■□□□□ 0.98
DDX1Q92499 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX1Q92499 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX1Q92499 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX1Q92499 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX1Q92499 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX1Q92499 ESRRAP1-201ENST00000400596 1257 ntBASIC21.19■□□□□ 0.98
DDX1Q92499 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX1Q92499 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.19■□□□□ 0.98
DDX1Q92499 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
DDX1Q92499 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.19■□□□□ 0.98
DDX1Q92499 AC091874.3-201ENST00000512672 1195 ntBASIC21.19■□□□□ 0.98
DDX1Q92499 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.19■□□□□ 0.98
DDX1Q92499 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX1Q92499 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
DDX1Q92499 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX1Q92499 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX1Q92499 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX1Q92499 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX1Q92499 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX1Q92499 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
DDX1Q92499 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
DDX1Q92499 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
DDX1Q92499 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX1Q92499 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX1Q92499 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.18■□□□□ 0.98
DDX1Q92499 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX1Q92499 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
DDX1Q92499 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX1Q92499 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
DDX1Q92499 MIR1224-201ENST00000408193 85 ntBASIC21.18■□□□□ 0.98
DDX1Q92499 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.18■□□□□ 0.98
DDX1Q92499 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DDX1Q92499 MYC-209ENST00000641252 345 ntBASIC21.18■□□□□ 0.98
DDX1Q92499 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX1Q92499 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DDX1Q92499 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
DDX1Q92499 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DDX1Q92499 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DDX1Q92499 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.18■□□□□ 0.98
DDX1Q92499 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX1Q92499 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
DDX1Q92499 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.17■□□□□ 0.98
DDX1Q92499 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
DDX1Q92499 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX1Q92499 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.17■□□□□ 0.98
DDX1Q92499 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX1Q92499 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
DDX1Q92499 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX1Q92499 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.17■□□□□ 0.98
DDX1Q92499 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DDX1Q92499 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms