Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 AL158211.5-201ENST00000623583 2518 ntBASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 AC009237.14-201ENST00000609975 1594 ntBASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH19Q8TAB3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 MIR4758-201ENST00000577688 71 ntBASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 MYC-209ENST00000641252 345 ntBASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH19Q8TAB3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PCDH19Q8TAB3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 AC073210.2-201ENST00000430369 194 ntBASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 TSPY20P-201ENST00000450910 630 ntBASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
PCDH19Q8TAB3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PCDH19Q8TAB3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH19Q8TAB3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH19Q8TAB3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH19Q8TAB3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDH19Q8TAB3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH19Q8TAB3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 PHGDH-210ENST00000641115 1638 ntBASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH19Q8TAB3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms