Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 AC116562.4-202ENST00000641738 218 ntBASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 FAM99A-202ENST00000538190 1989 ntBASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 HYMAI.1-201ENST00000620949 238 ntBASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC168Q8NDH2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 VENTXP5-201ENST00000523979 775 ntBASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 CCR12P-201ENST00000446203 998 ntBASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 C1QL1P1-201ENST00000568105 661 ntBASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 MIR3652-201ENST00000579335 131 ntBASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 AC096733.2-201ENST00000609937 1394 ntBASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC168Q8NDH2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 AL845331.1-201ENST00000424978 1190 ntBASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 AL136038.3-201ENST00000561909 1096 ntBASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.68■□□□□ 0.26
CCDC168Q8NDH2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 AL022342.1-201ENST00000400363 863 ntBASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 AL671883.3-201ENST00000603274 991 ntBASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 AC083849.1-201ENST00000615227 514 ntBASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC168Q8NDH2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms