Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.39■□□□□ 0.37
LRRK2Q5S007 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LRRK2Q5S007 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.39■□□□□ 0.37
LRRK2Q5S007 AC140113.3-201ENST00000605663 199 ntBASIC17.39■□□□□ 0.37
LRRK2Q5S007 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRK2Q5S007 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRK2Q5S007 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRK2Q5S007 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRK2Q5S007 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
LRRK2Q5S007 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LRRK2Q5S007 ATP5G2P1-201ENST00000433580 426 ntBASIC17.39■□□□□ 0.37
LRRK2Q5S007 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRK2Q5S007 AC117500.6-201ENST00000624871 588 ntBASIC17.39■□□□□ 0.37
LRRK2Q5S007 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRK2Q5S007 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRK2Q5S007 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRK2Q5S007 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
LRRK2Q5S007 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRK2Q5S007 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRK2Q5S007 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRK2Q5S007 AL441883.1-201ENST00000566170 1045 ntBASIC17.38■□□□□ 0.37
LRRK2Q5S007 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRK2Q5S007 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRK2Q5S007 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LRRK2Q5S007 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRK2Q5S007 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LRRK2Q5S007 PMS2P1-201ENST00000431037 1228 ntBASIC17.38■□□□□ 0.37
LRRK2Q5S007 IFNL4P1-201ENST00000607083 540 ntBASIC17.38■□□□□ 0.37
LRRK2Q5S007 AP000692.2-201ENST00000608391 879 ntBASIC17.38■□□□□ 0.37
LRRK2Q5S007 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRK2Q5S007 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRK2Q5S007 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRK2Q5S007 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRK2Q5S007 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRK2Q5S007 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRK2Q5S007 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRK2Q5S007 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRK2Q5S007 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRK2Q5S007 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRK2Q5S007 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
LRRK2Q5S007 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRK2Q5S007 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRK2Q5S007 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRK2Q5S007 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRK2Q5S007 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRRK2Q5S007 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRK2Q5S007 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRK2Q5S007 AC104692.2-201ENST00000603054 253 ntBASIC17.37■□□□□ 0.37
LRRK2Q5S007 AL023973.1-201ENST00000624619 620 ntBASIC17.37■□□□□ 0.37
LRRK2Q5S007 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRK2Q5S007 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRK2Q5S007 PRSS44-201ENST00000515154 1146 ntBASIC17.36■□□□□ 0.37
LRRK2Q5S007 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRK2Q5S007 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.36■□□□□ 0.37
LRRK2Q5S007 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.36■□□□□ 0.37
LRRK2Q5S007 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.36■□□□□ 0.37
LRRK2Q5S007 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LRRK2Q5S007 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRK2Q5S007 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
LRRK2Q5S007 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRK2Q5S007 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.35■□□□□ 0.37
LRRK2Q5S007 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRK2Q5S007 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRK2Q5S007 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRK2Q5S007 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRK2Q5S007 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRK2Q5S007 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRK2Q5S007 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRK2Q5S007 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRK2Q5S007 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 TSPY17P-201ENST00000450329 467 ntBASIC17.34■□□□□ 0.37
LRRK2Q5S007 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRK2Q5S007 AC092119.3-201ENST00000612618 583 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms