Protein–RNA interactions for Protein: P83917

Cbx1, Chromobox protein homolog 1, mousemouse

Known RBP Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx1P83917 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cbx1P83917 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cbx1P83917 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.36■□□□□ 0.53
Cbx1P83917 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.35■□□□□ 0.53
Cbx1P83917 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Cbx1P83917 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cbx1P83917 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.35■□□□□ 0.53
Cbx1P83917 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.35■□□□□ 0.53
Cbx1P83917 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cbx1P83917 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cbx1P83917 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.35■□□□□ 0.53
Cbx1P83917 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cbx1P83917 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Cbx1P83917 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Cbx1P83917 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Cbx1P83917 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cbx1P83917 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cbx1P83917 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cbx1P83917 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cbx1P83917 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cbx1P83917 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cbx1P83917 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cbx1P83917 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cbx1P83917 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cbx1P83917 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx1P83917 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
Cbx1P83917 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx1P83917 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.33■□□□□ 0.52
Cbx1P83917 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.33■□□□□ 0.52
Cbx1P83917 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.33■□□□□ 0.52
Cbx1P83917 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx1P83917 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx1P83917 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx1P83917 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx1P83917 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx1P83917 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cbx1P83917 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx1P83917 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cbx1P83917 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx1P83917 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cbx1P83917 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx1P83917 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx1P83917 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.32■□□□□ 0.52
Cbx1P83917 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cbx1P83917 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.32■□□□□ 0.52
Cbx1P83917 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx1P83917 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx1P83917 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx1P83917 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cbx1P83917 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cbx1P83917 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cbx1P83917 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cbx1P83917 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cbx1P83917 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms