Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCKAP1LP55160 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCKAP1LP55160 AC112907.3-201ENST00000577781 2400 ntBASIC21.83■■□□□ 1.09
NCKAP1LP55160 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCKAP1LP55160 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.83■■□□□ 1.09
NCKAP1LP55160 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.83■■□□□ 1.09
NCKAP1LP55160 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NCKAP1LP55160 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
NCKAP1LP55160 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NCKAP1LP55160 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NCKAP1LP55160 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NCKAP1LP55160 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
NCKAP1LP55160 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NCKAP1LP55160 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCKAP1LP55160 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCKAP1LP55160 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NCKAP1LP55160 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCKAP1LP55160 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.82■■□□□ 1.08
NCKAP1LP55160 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
NCKAP1LP55160 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCKAP1LP55160 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCKAP1LP55160 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.82■■□□□ 1.08
NCKAP1LP55160 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
NCKAP1LP55160 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.82■■□□□ 1.08
NCKAP1LP55160 AL121906.2-201ENST00000621597 723 ntBASIC21.82■■□□□ 1.08
NCKAP1LP55160 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
NCKAP1LP55160 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
NCKAP1LP55160 AC018553.1-201ENST00000616682 1458 ntBASIC21.82■■□□□ 1.08
NCKAP1LP55160 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NCKAP1LP55160 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.82■■□□□ 1.08
NCKAP1LP55160 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NCKAP1LP55160 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NCKAP1LP55160 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NCKAP1LP55160 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
NCKAP1LP55160 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.81■■□□□ 1.08
NCKAP1LP55160 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
NCKAP1LP55160 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.81■■□□□ 1.08
NCKAP1LP55160 MTDHP1-201ENST00000605323 784 ntBASIC21.81■■□□□ 1.08
NCKAP1LP55160 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.81■■□□□ 1.08
NCKAP1LP55160 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NCKAP1LP55160 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NCKAP1LP55160 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.8■■□□□ 1.08
NCKAP1LP55160 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCKAP1LP55160 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NCKAP1LP55160 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCKAP1LP55160 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.8■■□□□ 1.08
NCKAP1LP55160 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NCKAP1LP55160 TFP1-202ENST00000475455 1573 ntBASIC21.8■■□□□ 1.08
NCKAP1LP55160 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCKAP1LP55160 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCKAP1LP55160 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.8■■□□□ 1.08
NCKAP1LP55160 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.8■■□□□ 1.08
NCKAP1LP55160 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.8■■□□□ 1.08
NCKAP1LP55160 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCKAP1LP55160 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.8■■□□□ 1.08
NCKAP1LP55160 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NCKAP1LP55160 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCKAP1LP55160 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCKAP1LP55160 AP001271.2-201ENST00000624018 1556 ntBASIC21.79■■□□□ 1.08
NCKAP1LP55160 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCKAP1LP55160 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCKAP1LP55160 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCKAP1LP55160 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCKAP1LP55160 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCKAP1LP55160 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NCKAP1LP55160 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCKAP1LP55160 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.79■■□□□ 1.08
NCKAP1LP55160 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NCKAP1LP55160 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NCKAP1LP55160 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCKAP1LP55160 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NCKAP1LP55160 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NCKAP1LP55160 PRORSD1P-201ENST00000295112 541 ntBASIC21.78■■□□□ 1.08
NCKAP1LP55160 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NCKAP1LP55160 KRT18P29-201ENST00000397031 1267 ntBASIC21.78■■□□□ 1.08
NCKAP1LP55160 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NCKAP1LP55160 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.78■■□□□ 1.08
NCKAP1LP55160 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.78■■□□□ 1.08
NCKAP1LP55160 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.78■■□□□ 1.08
NCKAP1LP55160 RN7SL471P-201ENST00000580476 299 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms