Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN3P26045 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PTPN3P26045 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN3P26045 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN3P26045 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN3P26045 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN3P26045 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN3P26045 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.29■□□□□ 0.84
PTPN3P26045 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.29■□□□□ 0.84
PTPN3P26045 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN3P26045 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN3P26045 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN3P26045 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.29■□□□□ 0.84
PTPN3P26045 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN3P26045 AC104771.1-201ENST00000603335 964 ntBASIC20.29■□□□□ 0.84
PTPN3P26045 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN3P26045 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN3P26045 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN3P26045 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.29■□□□□ 0.84
PTPN3P26045 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PTPN3P26045 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PTPN3P26045 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN3P26045 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PTPN3P26045 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PTPN3P26045 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PTPN3P26045 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.28■□□□□ 0.84
PTPN3P26045 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PTPN3P26045 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PTPN3P26045 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN3P26045 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PTPN3P26045 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.28■□□□□ 0.84
PTPN3P26045 AC009237.14-201ENST00000609975 1594 ntBASIC20.28■□□□□ 0.84
PTPN3P26045 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.28■□□□□ 0.84
PTPN3P26045 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PTPN3P26045 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PTPN3P26045 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN3P26045 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTPN3P26045 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN3P26045 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN3P26045 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN3P26045 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN3P26045 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN3P26045 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN3P26045 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN3P26045 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.27■□□□□ 0.84
PTPN3P26045 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN3P26045 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PTPN3P26045 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN3P26045 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PTPN3P26045 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN3P26045 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PTPN3P26045 AC005829.2-201ENST00000571422 1056 ntBASIC20.27■□□□□ 0.84
PTPN3P26045 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PTPN3P26045 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN3P26045 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPN3P26045 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN3P26045 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN3P26045 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN3P26045 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN3P26045 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN3P26045 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN3P26045 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PTPN3P26045 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PTPN3P26045 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN3P26045 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.26■□□□□ 0.83
PTPN3P26045 AC097658.1-201ENST00000475555 843 ntBASIC20.26■□□□□ 0.83
PTPN3P26045 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN3P26045 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN3P26045 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.26■□□□□ 0.83
PTPN3P26045 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
PTPN3P26045 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN3P26045 PHGDH-210ENST00000641115 1638 ntBASIC20.26■□□□□ 0.83
PTPN3P26045 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
PTPN3P26045 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN3P26045 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPN3P26045 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN3P26045 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN3P26045 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPN3P26045 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPN3P26045 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PTPN3P26045 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PTPN3P26045 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN3P26045 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN3P26045 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN3P26045 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN3P26045 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN3P26045 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms