Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LAMA1P25391 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
LAMA1P25391 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LAMA1P25391 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LAMA1P25391 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.58■□□□□ 0.73
LAMA1P25391 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LAMA1P25391 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LAMA1P25391 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LAMA1P25391 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.58■□□□□ 0.73
LAMA1P25391 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.58■□□□□ 0.73
LAMA1P25391 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
LAMA1P25391 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.58■□□□□ 0.73
LAMA1P25391 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.58■□□□□ 0.72
LAMA1P25391 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LAMA1P25391 AL031133.1-201ENST00000406807 723 ntBASIC19.58■□□□□ 0.72
LAMA1P25391 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LAMA1P25391 ATP5G1P1-201ENST00000448724 379 ntBASIC19.58■□□□□ 0.72
LAMA1P25391 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.58■□□□□ 0.72
LAMA1P25391 KRT126P-201ENST00000549467 1181 ntBASIC19.58■□□□□ 0.72
LAMA1P25391 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.58■□□□□ 0.72
LAMA1P25391 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.58■□□□□ 0.72
LAMA1P25391 CR392000.1-201ENST00000624770 1228 ntBASIC19.58■□□□□ 0.72
LAMA1P25391 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LAMA1P25391 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.58■□□□□ 0.72
LAMA1P25391 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
LAMA1P25391 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LAMA1P25391 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMA1P25391 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LAMA1P25391 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.57■□□□□ 0.72
LAMA1P25391 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.57■□□□□ 0.72
LAMA1P25391 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMA1P25391 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMA1P25391 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LAMA1P25391 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.57■□□□□ 0.72
LAMA1P25391 NAPSB-206ENST00000562112 1266 ntBASIC19.57■□□□□ 0.72
LAMA1P25391 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.57■□□□□ 0.72
LAMA1P25391 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
LAMA1P25391 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMA1P25391 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LAMA1P25391 AP005242.2-201ENST00000580065 1175 ntBASIC19.57■□□□□ 0.72
LAMA1P25391 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LAMA1P25391 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMA1P25391 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMA1P25391 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMA1P25391 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.56■□□□□ 0.72
LAMA1P25391 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.56■□□□□ 0.72
LAMA1P25391 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LAMA1P25391 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.56■□□□□ 0.72
LAMA1P25391 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LAMA1P25391 B3GAT3P1-201ENST00000471720 806 ntBASIC19.56■□□□□ 0.72
LAMA1P25391 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LAMA1P25391 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.56■□□□□ 0.72
LAMA1P25391 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.56■□□□□ 0.72
LAMA1P25391 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMA1P25391 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.55■□□□□ 0.72
LAMA1P25391 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMA1P25391 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.55■□□□□ 0.72
LAMA1P25391 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMA1P25391 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.55■□□□□ 0.72
LAMA1P25391 LIN28AP1-201ENST00000429574 405 ntBASIC19.55■□□□□ 0.72
LAMA1P25391 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
LAMA1P25391 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.55■□□□□ 0.72
LAMA1P25391 AC010203.1-204ENST00000548782 407 ntBASIC19.55■□□□□ 0.72
LAMA1P25391 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMA1P25391 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
LAMA1P25391 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMA1P25391 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LAMA1P25391 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
LAMA1P25391 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LAMA1P25391 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LAMA1P25391 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.55■□□□□ 0.72
LAMA1P25391 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.55■□□□□ 0.72
LAMA1P25391 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.55■□□□□ 0.72
LAMA1P25391 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LAMA1P25391 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.54■□□□□ 0.72
LAMA1P25391 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LAMA1P25391 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LAMA1P25391 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LAMA1P25391 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LAMA1P25391 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.54■□□□□ 0.72
LAMA1P25391 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.54■□□□□ 0.72
LAMA1P25391 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LAMA1P25391 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.54■□□□□ 0.72
LAMA1P25391 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
LAMA1P25391 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.54■□□□□ 0.72
LAMA1P25391 FAM87A-204ENST00000613235 858 ntBASIC19.54■□□□□ 0.72
LAMA1P25391 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LAMA1P25391 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms