Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NFKB1P19838 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NFKB1P19838 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.24■□□□□ 0.83
NFKB1P19838 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NFKB1P19838 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB1P19838 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.24■□□□□ 0.83
NFKB1P19838 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.24■□□□□ 0.83
NFKB1P19838 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB1P19838 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.24■□□□□ 0.83
NFKB1P19838 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NFKB1P19838 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.24■□□□□ 0.83
NFKB1P19838 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB1P19838 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB1P19838 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB1P19838 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB1P19838 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.24■□□□□ 0.83
NFKB1P19838 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB1P19838 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB1P19838 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
NFKB1P19838 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.24■□□□□ 0.83
NFKB1P19838 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.24■□□□□ 0.83
NFKB1P19838 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NFKB1P19838 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB1P19838 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB1P19838 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.23■□□□□ 0.83
NFKB1P19838 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB1P19838 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB1P19838 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB1P19838 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB1P19838 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB1P19838 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB1P19838 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.23■□□□□ 0.83
NFKB1P19838 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.23■□□□□ 0.83
NFKB1P19838 MYC-209ENST00000641252 345 ntBASIC20.23■□□□□ 0.83
NFKB1P19838 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB1P19838 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NFKB1P19838 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.23■□□□□ 0.83
NFKB1P19838 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NFKB1P19838 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB1P19838 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
NFKB1P19838 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB1P19838 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB1P19838 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
NFKB1P19838 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NFKB1P19838 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.22■□□□□ 0.83
NFKB1P19838 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
NFKB1P19838 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB1P19838 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.22■□□□□ 0.83
NFKB1P19838 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NFKB1P19838 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB1P19838 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB1P19838 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.22■□□□□ 0.83
NFKB1P19838 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.22■□□□□ 0.83
NFKB1P19838 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB1P19838 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NFKB1P19838 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.22■□□□□ 0.83
NFKB1P19838 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NFKB1P19838 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB1P19838 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB1P19838 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NFKB1P19838 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.21■□□□□ 0.83
NFKB1P19838 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.21■□□□□ 0.83
NFKB1P19838 AC097658.1-201ENST00000475555 843 ntBASIC20.21■□□□□ 0.83
NFKB1P19838 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB1P19838 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.21■□□□□ 0.83
NFKB1P19838 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB1P19838 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB1P19838 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.21■□□□□ 0.83
NFKB1P19838 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
NFKB1P19838 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB1P19838 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
NFKB1P19838 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NFKB1P19838 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
NFKB1P19838 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NFKB1P19838 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.21■□□□□ 0.83
NFKB1P19838 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB1P19838 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NFKB1P19838 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.2■□□□□ 0.82
NFKB1P19838 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NFKB1P19838 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
NFKB1P19838 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NFKB1P19838 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.2■□□□□ 0.82
NFKB1P19838 AC083880.1-201ENST00000608266 535 ntBASIC20.2■□□□□ 0.82
NFKB1P19838 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NFKB1P19838 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NFKB1P19838 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.2■□□□□ 0.82
NFKB1P19838 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.2■□□□□ 0.82
NFKB1P19838 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NFKB1P19838 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NFKB1P19838 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms