Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.73■□□□□ 0.91
HMGA1P17096 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.73■□□□□ 0.91
HMGA1P17096 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.73■□□□□ 0.91
HMGA1P17096 AP006587.1-201ENST00000534129 1502 ntBASIC20.73■□□□□ 0.91
HMGA1P17096 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
HMGA1P17096 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGA1P17096 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA1P17096 AL137060.1-201ENST00000618151 2648 ntBASIC20.72■□□□□ 0.91
HMGA1P17096 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA1P17096 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA1P17096 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA1P17096 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGA1P17096 AP002982.1-201ENST00000492365 877 ntBASIC20.72■□□□□ 0.91
HMGA1P17096 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA1P17096 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HMGA1P17096 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGA1P17096 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HMGA1P17096 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGA1P17096 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA1P17096 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA1P17096 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGA1P17096 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGA1P17096 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA1P17096 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGA1P17096 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HMGA1P17096 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
HMGA1P17096 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGA1P17096 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HMGA1P17096 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGA1P17096 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGA1P17096 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HMGA1P17096 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HMGA1P17096 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HMGA1P17096 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGA1P17096 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGA1P17096 AL355355.2-201ENST00000442321 338 ntBASIC20.71■□□□□ 0.91
HMGA1P17096 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.71■□□□□ 0.91
HMGA1P17096 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
HMGA1P17096 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HMGA1P17096 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.71■□□□□ 0.91
HMGA1P17096 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.71■□□□□ 0.91
HMGA1P17096 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.71■□□□□ 0.91
HMGA1P17096 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.71■□□□□ 0.91
HMGA1P17096 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGA1P17096 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HMGA1P17096 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGA1P17096 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
HMGA1P17096 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HMGA1P17096 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HMGA1P17096 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HMGA1P17096 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGA1P17096 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGA1P17096 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HMGA1P17096 NIFKP9-201ENST00000419265 221 ntBASIC20.7■□□□□ 0.9
HMGA1P17096 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HMGA1P17096 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.7■□□□□ 0.9
HMGA1P17096 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.7■□□□□ 0.9
HMGA1P17096 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HMGA1P17096 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HMGA1P17096 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGA1P17096 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.7■□□□□ 0.9
HMGA1P17096 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.7■□□□□ 0.9
HMGA1P17096 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGA1P17096 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HMGA1P17096 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HMGA1P17096 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HMGA1P17096 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA1P17096 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA1P17096 PHGDH-210ENST00000641115 1638 ntBASIC20.69■□□□□ 0.9
HMGA1P17096 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
HMGA1P17096 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA1P17096 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.69■□□□□ 0.9
HMGA1P17096 AC087499.1-201ENST00000418141 1075 ntBASIC20.69■□□□□ 0.9
HMGA1P17096 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.69■□□□□ 0.9
HMGA1P17096 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.69■□□□□ 0.9
HMGA1P17096 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.69■□□□□ 0.9
HMGA1P17096 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.69■□□□□ 0.9
HMGA1P17096 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
HMGA1P17096 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.69■□□□□ 0.9
HMGA1P17096 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA1P17096 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA1P17096 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HMGA1P17096 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA1P17096 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA1P17096 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.68■□□□□ 0.9
HMGA1P17096 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
HMGA1P17096 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA1P17096 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA1P17096 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA1P17096 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA1P17096 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.68■□□□□ 0.9
HMGA1P17096 NUDT16P1-203ENST00000513809 620 ntBASIC20.68■□□□□ 0.9
HMGA1P17096 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.68■□□□□ 0.9
HMGA1P17096 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.68■□□□□ 0.9
HMGA1P17096 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.68■□□□□ 0.9
HMGA1P17096 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA1P17096 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HMGA1P17096 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HMGA1P17096 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA1P17096 BX119927.1-201ENST00000636596 1552 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms