Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE3O75131 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE3O75131 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.08■□□□□ 0.65
CPNE3O75131 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE3O75131 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CPNE3O75131 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CPNE3O75131 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.65
CPNE3O75131 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CPNE3O75131 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.08■□□□□ 0.64
CPNE3O75131 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.08■□□□□ 0.64
CPNE3O75131 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CPNE3O75131 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE3O75131 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE3O75131 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CPNE3O75131 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE3O75131 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE3O75131 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE3O75131 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE3O75131 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE3O75131 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CPNE3O75131 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE3O75131 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE3O75131 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 KRASP1-201ENST00000407852 552 ntBASIC19.07■□□□□ 0.64
CPNE3O75131 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.07■□□□□ 0.64
CPNE3O75131 AC110285.5-201ENST00000611501 352 ntBASIC19.07■□□□□ 0.64
CPNE3O75131 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.07■□□□□ 0.64
CPNE3O75131 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CPNE3O75131 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE3O75131 FEM1AP4-201ENST00000443167 1987 ntBASIC19.06■□□□□ 0.64
CPNE3O75131 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE3O75131 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE3O75131 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.06■□□□□ 0.64
CPNE3O75131 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CPNE3O75131 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE3O75131 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE3O75131 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE3O75131 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE3O75131 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE3O75131 MIR4497-201ENST00000583208 89 ntBASIC19.06■□□□□ 0.64
CPNE3O75131 Z99916.2-201ENST00000604037 246 ntBASIC19.06■□□□□ 0.64
CPNE3O75131 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CPNE3O75131 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.06■□□□□ 0.64
CPNE3O75131 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE3O75131 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE3O75131 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE3O75131 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.06■□□□□ 0.64
CPNE3O75131 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CPNE3O75131 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE3O75131 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CPNE3O75131 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE3O75131 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE3O75131 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE3O75131 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CPNE3O75131 AC012618.2-201ENST00000428058 849 ntBASIC19.05■□□□□ 0.64
CPNE3O75131 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.05■□□□□ 0.64
CPNE3O75131 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.05■□□□□ 0.64
CPNE3O75131 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.05■□□□□ 0.64
CPNE3O75131 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.05■□□□□ 0.64
CPNE3O75131 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE3O75131 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.05■□□□□ 0.64
CPNE3O75131 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE3O75131 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CPNE3O75131 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CPNE3O75131 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CPNE3O75131 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CPNE3O75131 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CPNE3O75131 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE3O75131 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.04■□□□□ 0.64
CPNE3O75131 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE3O75131 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE3O75131 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE3O75131 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.04■□□□□ 0.64
CPNE3O75131 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.04■□□□□ 0.64
CPNE3O75131 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CPNE3O75131 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE3O75131 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE3O75131 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE3O75131 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.04■□□□□ 0.64
CPNE3O75131 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPNE3O75131 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE3O75131 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE3O75131 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE3O75131 AL135905.2-201ENST00000584934 1404 ntBASIC19.03■□□□□ 0.64
CPNE3O75131 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE3O75131 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE3O75131 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE3O75131 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE3O75131 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms