Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC162PA2VCL2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 MYC-209ENST00000641252 345 ntBASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC162PA2VCL2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC162PA2VCL2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 TMEM179-206ENST00000616017 1645 ntBASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 AC125437.2-201ENST00000625180 2167 ntBASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 AC097658.1-201ENST00000475555 843 ntBASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC162PA2VCL2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC162PA2VCL2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC162PA2VCL2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC162PA2VCL2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC162PA2VCL2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC162PA2VCL2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC162PA2VCL2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC162PA2VCL2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC162PA2VCL2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC162PA2VCL2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms