Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 DUX4L16-201ENST00000555130 1264 ntBASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 BID-214ENST00000617586 542 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
TRAV12-3A0A0B4J271 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 AC068338.2-201ENST00000563278 1430 ntBASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 MCRIP2P1-201ENST00000394346 511 ntBASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 RARRES2P4-201ENST00000514074 484 ntBASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 MIR5787-201ENST00000611784 55 ntBASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 AC008694.1-202ENST00000636953 945 ntBASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 AL691432.2-201ENST00000607222 2038 ntBASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV12-3A0A0B4J271 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 BX119927.1-201ENST00000636596 1552 ntBASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.77□□□□□ -0.04
TRAV12-3A0A0B4J271 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 AC006015.1-201ENST00000429970 570 ntBASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 CNN2P6-201ENST00000439038 900 ntBASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 AL162430.1-201ENST00000480705 870 ntBASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 AC069236.1-201ENST00000604339 616 ntBASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV12-3A0A0B4J271 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.76□□□□□ -0.05
TRAV12-3A0A0B4J271 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms