Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 RPL12P49-201ENST00000441100 121 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AC011742.2-201ENST00000443818 352 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 RPS3AP49-201ENST00000472161 790 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AC023818.1-201ENST00000498379 384 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 BMS1P16-201ENST00000556075 1147 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AC004908.1-201ENST00000606572 541 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AC211486.4-201ENST00000621495 113 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 AC034229.6-201ENST00000623704 224 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 PABPC1P8-201ENST00000452851 2086 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 MARK2P4-201ENST00000503381 2380 ntBASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC092646.2-201ENST00000431242 2095 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC026310.1-201ENST00000396004 378 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 RPEP4-201ENST00000437636 602 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AL034369.1-201ENST00000453808 477 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 RN7SL216P-201ENST00000471607 298 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC131233.1-201ENST00000479200 955 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 RN7SL37P-201ENST00000490461 307 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 RPL9P15-201ENST00000491096 532 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC253576.1-201ENST00000511645 1156 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 SETP17-201ENST00000534163 817 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 RPS11-205ENST00000599561 430 ntTSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AC112243.1-201ENST00000623949 3851 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 MAPK10-344ENST00000641718 3746 ntBASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CLIP2Q9UDT6 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms