Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 SALL4P7-201ENST00000555779 3120 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 CUBNP3-201ENST00000457461 1784 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC010894.1-201ENST00000313760 361 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 RNA5SP321-201ENST00000362722 111 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 SNORA7A-201ENST00000384765 139 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC019178.1-201ENST00000392337 440 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 PA2G4P1-201ENST00000442248 1197 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 WDR82P2-201ENST00000444540 928 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC113191.1-201ENST00000517759 403 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC244034.2-201ENST00000562504 509 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC036176.3-201ENST00000602456 418 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AL138693.1-201ENST00000622219 129 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AL035425.4-201ENST00000624509 1063 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 FANCD2P2-201ENST00000437591 1400 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 NEK2P4-201ENST00000425793 1329 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AL512310.3-201ENST00000547023 1335 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC119674.1-204ENST00000641348 1343 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC067942.1-201ENST00000488045 1493 ntBASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.22□□□□□ -1.41
C9orf40Q8IXQ3 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
C9orf40Q8IXQ3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.41
C9orf40Q8IXQ3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
C9orf40Q8IXQ3 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.21□□□□□ -1.41
C9orf40Q8IXQ3 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
C9orf40Q8IXQ3 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
C9orf40Q8IXQ3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
C9orf40Q8IXQ3 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 RNA5SP308-201ENST00000362532 115 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 RPL12P23-201ENST00000405880 490 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 RPL6P21-201ENST00000418672 846 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 RPS7P12-201ENST00000422385 582 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AC133965.1-201ENST00000452984 354 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 AL390198.2-201ENST00000510553 222 ntBASIC6.21□□□□□ -1.42
C9orf40Q8IXQ3 OR52H2P-201ENST00000514607 902 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms