Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 IMPA1P1-201ENST00000510718 842 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC022483.1-201ENST00000514020 567 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 RNU6-964P-201ENST00000516524 69 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC011379.2-201ENST00000523154 583 ntTSL 4 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 MIR4450-201ENST00000583589 65 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC005261.5-201ENST00000596280 355 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AL031429.2-201ENST00000602605 649 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 DUXAP4-201ENST00000603046 613 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC013553.2-201ENST00000604244 589 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC135507.2-201ENST00000612443 309 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC027139.2-201ENST00000615639 448 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 AC012414.7-202ENST00000622705 1090 ntBASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
SCUBE3Q8IX30 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
SCUBE3Q8IX30 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC8.9□□□□□ -0.99
SCUBE3Q8IX30 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
SCUBE3Q8IX30 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SCUBE3Q8IX30 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
SCUBE3Q8IX30 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
SCUBE3Q8IX30 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
SCUBE3Q8IX30 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC8.9□□□□□ -0.99
SCUBE3Q8IX30 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SCUBE3Q8IX30 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AL356289.3-201ENST00000640049 2669 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 EPS15P1-202ENST00000459691 2071 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC091152.4-201ENST00000623480 3483 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 ODF1-201ENST00000285402 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 Y_RNA.326-201ENST00000365176 113 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 MIR1184-2-201ENST00000408263 99 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 MIR1184-1-201ENST00000408606 99 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 MIR1184-3-201ENST00000408676 99 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 ATP5G1P5-201ENST00000429024 411 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 RN7SL418P-201ENST00000473031 287 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 RN7SL630P-201ENST00000483714 297 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 GAPDHP22-201ENST00000491037 413 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 RNU6-1045P-201ENST00000516321 107 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC023632.1-201ENST00000518463 375 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC020688.1-201ENST00000519282 1248 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC006960.3-201ENST00000561845 705 ntBASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 MYLK-221ENST00000583087 678 ntTSL 4 BASIC8.89□□□□□ -0.99
SCUBE3Q8IX30 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms