Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RN7SL518P-201ENST00000491887 280 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 OR2A3P-201ENST00000493774 953 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC021220.1-201ENST00000507445 630 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC026774.2-201ENST00000513990 1098 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AP006587.5-201ENST00000532033 739 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC007537.1-201ENST00000539347 327 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AL132640.1-201ENST00000559594 619 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 PRELID3BP3-201ENST00000584963 545 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC008626.2-201ENST00000624425 248 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AC026108.1-201ENST00000635444 547 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AP000641.1-201ENST00000531988 1639 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AL591848.4-201ENST00000567832 3472 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NHLRC1Q6VVB1 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AC096992.2-201ENST00000609553 1684 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 RNU12-2P-201ENST00000364789 156 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 RNU6-316P-201ENST00000391027 107 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 RN7SKP117-201ENST00000410175 264 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 RNA5SP280-201ENST00000411230 115 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 PPIAP23-201ENST00000420099 497 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AL138479.1-201ENST00000426913 484 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AC007365.2-201ENST00000428806 458 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AL645936.2-201ENST00000430565 928 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 PHB2P1-201ENST00000434943 890 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 NMNAT1P3-201ENST00000457517 888 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 RN7SL456P-201ENST00000469290 295 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 OR10J9P-201ENST00000511932 987 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 MIR4800-201ENST00000537353 80 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AP005901.4-201ENST00000577336 569 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 WDR45BP1-201ENST00000583470 1029 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 MIR5682-201ENST00000584864 76 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AC007255.2-201ENST00000604053 631 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 AP003400.2-201ENST00000624036 666 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 SNORA16A-202ENST00000628458 135 ntBASIC6.15□□□□□ -1.42
NHLRC1Q6VVB1 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NHLRC1Q6VVB1 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NHLRC1Q6VVB1 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.15□□□□□ -1.43
NHLRC1Q6VVB1 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
NHLRC1Q6VVB1 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NHLRC1Q6VVB1 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.15□□□□□ -1.43
NHLRC1Q6VVB1 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.15□□□□□ -1.43
NHLRC1Q6VVB1 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
NHLRC1Q6VVB1 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AL512329.1-201ENST00000404600 1592 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC010168.2-201ENST00000562691 5428 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AC034229.2-201ENST00000566945 2508 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 PDCL3P5-201ENST00000398028 722 ntBASIC6.14□□□□□ -1.43
NHLRC1Q6VVB1 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms