Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 RN7SL199P-201ENST00000578752 281 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 RN7SL656P-201ENST00000579044 281 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 RN7SL404P-201ENST00000582421 281 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AL359704.2-201ENST00000604335 521 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 CYCSP1-201ENST00000604815 315 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AC103564.3-201ENST00000621194 220 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 CDY10P-201ENST00000452415 1567 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 ZNF840P-201ENST00000504759 1996 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AC068733.2-201ENST00000605434 1418 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AP000866.6-201ENST00000638898 3579 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AC007406.5-201ENST00000570140 3170 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AC240504.1-201ENST00000395709 845 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AL592114.2-201ENST00000440142 532 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AL359839.1-201ENST00000451975 1160 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 RN7SL216P-201ENST00000471607 298 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 OR7A11P-201ENST00000597719 953 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AL513218.1-201ENST00000606527 391 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AC073575.2-201ENST00000614212 627 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AC009283.1-201ENST00000615852 645 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AL121985.3-201ENST00000620690 523 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 BRD7P1-201ENST00000557705 1915 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AC016251.2-201ENST00000623393 3089 ntBASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZNF549Q6P9A3 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 LCOR-201ENST00000286067 4542 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AC022905.1-201ENST00000503430 3048 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 CASC19-243ENST00000641588 1546 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 RNU1-55P-201ENST00000365510 158 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 MIR187-201ENST00000385062 109 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 RNA5SP474-201ENST00000391234 90 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 RNA5SP35-201ENST00000391257 129 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 AL663061.1-201ENST00000416625 580 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 GAPDHP57-201ENST00000424400 585 ntBASIC6.66□□□□□ -1.34
ZNF549Q6P9A3 ETF1P1-206ENST00000427296 984 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms