Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC004241.3-201ENST00000611728 517 ntBASIC6.45□□□□□ -1.38
CLRN1P58418 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.45□□□□□ -1.38
CLRN1P58418 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.45□□□□□ -1.38
CLRN1P58418 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.45□□□□□ -1.38
CLRN1P58418 AL355480.4-201ENST00000626823 69 ntBASIC6.45□□□□□ -1.38
CLRN1P58418 AL590396.4-201ENST00000636779 956 ntBASIC6.45□□□□□ -1.38
CLRN1P58418 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CLRN1P58418 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLRN1P58418 AC067942.1-201ENST00000488045 1493 ntBASIC6.45□□□□□ -1.38
CLRN1P58418 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLRN1P58418 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLRN1P58418 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CLRN1P58418 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CLRN1P58418 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLRN1P58418 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLRN1P58418 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLRN1P58418 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CLRN1P58418 AL157713.1-201ENST00000379752 1531 ntBASIC6.45□□□□□ -1.38
CLRN1P58418 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.45□□□□□ -1.38
CLRN1P58418 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
CLRN1P58418 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLRN1P58418 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 AL136298.2-201ENST00000556497 1570 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 AC090771.1-201ENST00000585803 1618 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.44□□□□□ -1.38
CLRN1P58418 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.44□□□□□ -1.38
CLRN1P58418 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 OR7A2P-201ENST00000304105 930 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 RNA5SP396-201ENST00000364834 120 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 NRIR-201ENST00000366140 799 ntTSL 3 BASIC6.44□□□□□ -1.38
CLRN1P58418 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CLRN1P58418 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CLRN1P58418 RPL5P5-201ENST00000392009 893 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 OR7E117P-201ENST00000422682 1112 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 PPIL1P1-201ENST00000423936 499 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 RPL5P34-201ENST00000426545 891 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 MTCO1P45-201ENST00000431457 267 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 PTP4A1P3-201ENST00000433661 420 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.44□□□□□ -1.38
CLRN1P58418 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.44□□□□□ -1.38
CLRN1P58418 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC6.44□□□□□ -1.38
CLRN1P58418 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 AL009048.1-201ENST00000450437 298 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 PSPC1P2-201ENST00000455130 225 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC6.44□□□□□ -1.38
CLRN1P58418 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.44□□□□□ -1.38
CLRN1P58418 RPL32P14-201ENST00000463196 378 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.44□□□□□ -1.38
CLRN1P58418 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.44□□□□□ -1.38
CLRN1P58418 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.44□□□□□ -1.38
CLRN1P58418 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 FABP5P6-201ENST00000510588 409 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.44□□□□□ -1.38
CLRN1P58418 AC084851.2-201ENST00000530377 364 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 NPM1P35-201ENST00000533043 868 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 EGLN3P1-201ENST00000541727 720 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 MIR4509-3-201ENST00000578671 94 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 MIR4509-2-201ENST00000583920 94 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 AP001160.4-201ENST00000596971 382 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 AC068802.1-201ENST00000603420 732 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.44□□□□□ -1.38
CLRN1P58418 ELOCP35-201ENST00000604289 336 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 AC112503.1-201ENST00000608436 391 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 MIR1264-201ENST00000616374 69 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 MIR4509-1-201ENST00000618224 94 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 PART1_3.1-201ENST00000619680 131 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 AC019226.2-201ENST00000625973 424 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 FGL2-202ENST00000637771 989 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 AC005614.1-201ENST00000598952 3653 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLRN1P58418 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CLRN1P58418 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.44□□□□□ -1.38
CLRN1P58418 AL355974.1-201ENST00000618896 1708 ntBASIC6.44□□□□□ -1.38
CLRN1P58418 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms