Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.1□□□□□ -1.43
SOX2P48431 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
SOX2P48431 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SOX2P48431 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SOX2P48431 AC130456.1-201ENST00000565085 1363 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX2P48431 RNA5SP512-201ENST00000364550 120 ntBASIC6.09□□□□□ -1.43
SOX2P48431 ARMCX7P-201ENST00000372828 562 ntBASIC6.09□□□□□ -1.43
SOX2P48431 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX2P48431 AC017104.2-201ENST00000417000 321 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX2P48431 AC017019.1-201ENST00000426129 261 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX2P48431 AL392003.1-201ENST00000434394 243 ntBASIC6.09□□□□□ -1.43
SOX2P48431 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SOX2P48431 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC6.09□□□□□ -1.43
SOX2P48431 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX2P48431 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 OR7E102P-201ENST00000448855 1015 ntBASIC6.09□□□□□ -1.43
SOX2P48431 PSMA6P2-201ENST00000457574 686 ntBASIC6.09□□□□□ -1.43
SOX2P48431 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX2P48431 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX2P48431 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX2P48431 RN7SL338P-201ENST00000481467 293 ntBASIC6.09□□□□□ -1.43
SOX2P48431 RN7SL608P-201ENST00000492377 279 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AC107956.2-201ENST00000496042 454 ntBASIC6.09□□□□□ -1.43
SOX2P48431 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX2P48431 AC008417.1-201ENST00000510014 565 ntBASIC6.09□□□□□ -1.43
SOX2P48431 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX2P48431 MTND1P6-201ENST00000523621 946 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX2P48431 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX2P48431 AC096708.2-201ENST00000577676 512 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX2P48431 MIR4470-201ENST00000583453 72 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX2P48431 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX2P48431 CARSP1-201ENST00000603171 889 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AC008385.1-201ENST00000604421 355 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AL513218.1-201ENST00000606527 391 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AL391834.1-201ENST00000609609 560 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AC138904.2-201ENST00000614412 107 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AL590410.1-201ENST00000617925 333 ntBASIC6.09□□□□□ -1.43
SOX2P48431 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX2P48431 C18orf12-201ENST00000623329 537 ntBASIC6.09□□□□□ -1.43
SOX2P48431 AC006453.5-201ENST00000636451 619 ntBASIC6.09□□□□□ -1.43
SOX2P48431 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX2P48431 AL022323.4-201ENST00000623980 13120 ntBASIC6.09□□□□□ -1.43
SOX2P48431 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
SOX2P48431 AC083806.2-201ENST00000617795 2685 ntBASIC6.09□□□□□ -1.44
SOX2P48431 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.09□□□□□ -1.44
SOX2P48431 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
SOX2P48431 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX2P48431 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SOX2P48431 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX2P48431 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX2P48431 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SOX2P48431 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SOX2P48431 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SOX2P48431 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
SOX2P48431 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX2P48431 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
SOX2P48431 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SOX2P48431 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX2P48431 SNORA51.7-201ENST00000384171 134 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AL034372.1-201ENST00000407586 754 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX2P48431 RPSAP59-201ENST00000421048 890 ntBASIC6.08□□□□□ -1.44
SOX2P48431 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX2P48431 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.08□□□□□ -1.44
SOX2P48431 MED15P9-201ENST00000424716 533 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX2P48431 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX2P48431 RPSAP62-201ENST00000432596 833 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX2P48431 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX2P48431 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX2P48431 AL606490.8-201ENST00000441624 319 ntBASIC6.08□□□□□ -1.44
SOX2P48431 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.08□□□□□ -1.44
SOX2P48431 CYCSP44-201ENST00000448560 313 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AL591379.2-201ENST00000450223 397 ntBASIC6.08□□□□□ -1.44
SOX2P48431 ATP5G1P6-201ENST00000451206 412 ntBASIC6.08□□□□□ -1.44
SOX2P48431 AC016550.1-201ENST00000505348 785 ntBASIC6.08□□□□□ -1.44
SOX2P48431 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC6.08□□□□□ -1.44
SOX2P48431 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX2P48431 AC111000.1-201ENST00000514545 713 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms