Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 AC022905.1-201ENST00000503430 3048 ntBASIC6.2□□□□□ -1.42
SHC1P29353 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 DLEU2L-201ENST00000371086 3555 ntBASIC6.19□□□□□ -1.42
SHC1P29353 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.19□□□□□ -1.42
SHC1P29353 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHC1P29353 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHC1P29353 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHC1P29353 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHC1P29353 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.19□□□□□ -1.42
SHC1P29353 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHC1P29353 RN7SKP271-201ENST00000410528 320 ntBASIC6.19□□□□□ -1.42
SHC1P29353 OR52N3P-201ENST00000413417 934 ntBASIC6.19□□□□□ -1.42
SHC1P29353 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.19□□□□□ -1.42
SHC1P29353 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.19□□□□□ -1.42
SHC1P29353 NMNAT1P3-201ENST00000457517 888 ntBASIC6.19□□□□□ -1.42
SHC1P29353 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.19□□□□□ -1.42
SHC1P29353 AC087360.1-201ENST00000518788 616 ntBASIC6.19□□□□□ -1.42
SHC1P29353 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHC1P29353 AP004607.6-201ENST00000525033 1202 ntBASIC6.19□□□□□ -1.42
SHC1P29353 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.19□□□□□ -1.42
SHC1P29353 AC026458.1-201ENST00000564330 438 ntBASIC6.19□□□□□ -1.42
SHC1P29353 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.19□□□□□ -1.42
SHC1P29353 RN7SL42P-201ENST00000579786 294 ntBASIC6.19□□□□□ -1.42
SHC1P29353 CTSLP2-201ENST00000580501 394 ntBASIC6.19□□□□□ -1.42
SHC1P29353 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.19□□□□□ -1.42
SHC1P29353 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.19□□□□□ -1.42
SHC1P29353 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.19□□□□□ -1.42
SHC1P29353 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.19□□□□□ -1.42
SHC1P29353 PTCHD3P1-201ENST00000612350 537 ntBASIC6.19□□□□□ -1.42
SHC1P29353 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.19□□□□□ -1.42
SHC1P29353 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.19□□□□□ -1.42
SHC1P29353 AC005355.2-201ENST00000625064 484 ntBASIC6.19□□□□□ -1.42
SHC1P29353 AC140479.4-205ENST00000636339 820 ntBASIC6.19□□□□□ -1.42
SHC1P29353 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.19□□□□□ -1.42
SHC1P29353 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.19□□□□□ -1.42
SHC1P29353 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHC1P29353 AL391261.1-201ENST00000555712 1479 ntBASIC6.19□□□□□ -1.42
SHC1P29353 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHC1P29353 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHC1P29353 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
SHC1P29353 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.19□□□□□ -1.42
SHC1P29353 AL512353.3-201ENST00000417517 1326 ntBASIC6.19□□□□□ -1.42
SHC1P29353 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHC1P29353 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHC1P29353 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
SHC1P29353 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.18□□□□□ -1.42
SHC1P29353 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
SHC1P29353 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 OR10D1P-201ENST00000355343 936 ntBASIC6.18□□□□□ -1.42
SHC1P29353 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.18□□□□□ -1.42
SHC1P29353 MIR541-201ENST00000401360 84 ntBASIC6.18□□□□□ -1.42
SHC1P29353 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 NPM1P36-201ENST00000415681 835 ntBASIC6.18□□□□□ -1.42
SHC1P29353 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.18□□□□□ -1.42
SHC1P29353 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.18□□□□□ -1.42
SHC1P29353 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.18□□□□□ -1.42
SHC1P29353 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.18□□□□□ -1.42
SHC1P29353 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.18□□□□□ -1.42
SHC1P29353 GOT2P2-201ENST00000450663 1251 ntBASIC6.18□□□□□ -1.42
SHC1P29353 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.18□□□□□ -1.42
SHC1P29353 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 AL079303.1-201ENST00000486611 463 ntBASIC6.18□□□□□ -1.42
SHC1P29353 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.18□□□□□ -1.42
SHC1P29353 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 AP000662.1-201ENST00000530952 487 ntBASIC6.18□□□□□ -1.42
SHC1P29353 AP002004.1-206ENST00000532441 876 ntBASIC6.18□□□□□ -1.42
SHC1P29353 PHBP2-201ENST00000532859 806 ntBASIC6.18□□□□□ -1.42
SHC1P29353 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHC1P29353 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.18□□□□□ -1.42
SHC1P29353 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.18□□□□□ -1.42
SHC1P29353 AC067852.5-201ENST00000589299 310 ntBASIC6.18□□□□□ -1.42
SHC1P29353 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.18□□□□□ -1.42
SHC1P29353 AL683813.2-201ENST00000605245 502 ntBASIC6.18□□□□□ -1.42
SHC1P29353 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.18□□□□□ -1.42
SHC1P29353 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.18□□□□□ -1.42
SHC1P29353 AC091059.2-201ENST00000623355 614 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms