Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC112173.1-201ENST00000505876 327 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 Vault.2-201ENST00000516519 98 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 RNU1-125P-201ENST00000516752 129 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC100849.1-203ENST00000518417 723 ntTSL 4 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC009927.2-201ENST00000520812 481 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 IGHV3-50-201ENST00000522107 317 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 TMEM185AP1-201ENST00000524311 546 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 SLA-223ENST00000524345 1003 ntTSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AP003532.1-201ENST00000529936 310 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 ZNF123P-201ENST00000531501 1196 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AMN1-207ENST00000536761 1025 ntTSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC009729.1-201ENST00000548873 1133 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC069240.2-201ENST00000550242 609 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC122134.1-201ENST00000565664 1104 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 RPIAP1-201ENST00000587900 742 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 ZNF799-204ENST00000595766 576 ntTSL 4 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 PLS3-AS1-201ENST00000606397 521 ntTSL 4 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC011840.6-201ENST00000624536 610 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 GHR-212ENST00000620156 4529 ntTSL 5 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 OR3A4P-202ENST00000624752 1461 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 RBM17-205ENST00000446108 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 CASC19-243ENST00000641588 1546 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC023818.2-201ENST00000623817 2304 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AOX2P-204ENST00000487742 3284 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 LINC02254-201ENST00000558621 1726 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 ZNF33BP1-201ENST00000452497 1834 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AL031229.1-201ENST00000404273 224 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 TTLL11-IT1-201ENST00000411790 1052 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC068051.1-201ENST00000412896 442 ntTSL 4 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 RPS27AP14-201ENST00000422868 454 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC018644.1-201ENST00000429934 551 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 RPSAP33-201ENST00000432315 865 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 IFNA13-201ENST00000449498 634 ntAPPRIS ALT1 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC140076.1-201ENST00000449897 361 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 RANP1-206ENST00000455094 651 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 ARHGAP31-AS1-201ENST00000466292 624 ntTSL 4 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC074386.1-201ENST00000476560 767 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 AL451124.1-201ENST00000478520 1026 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC016968.1-201ENST00000479610 697 ntTSL 3 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 EIF4E2P2-201ENST00000492033 736 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC018450.2-201ENST00000492307 368 ntTSL 3 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 RPL22-208ENST00000497965 786 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC010307.2-202ENST00000502776 570 ntTSL 4 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 NPM1P27-201ENST00000502784 830 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 Y_RNA.693-201ENST00000516641 110 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 IGHVII-15-1-201ENST00000517931 220 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 IGLVI-56-201ENST00000521342 342 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 BRWD1P2-201ENST00000546823 340 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 NACA-211ENST00000548563 827 ntTSL 5 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AL512310.1-201ENST00000548639 172 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 CIPC-206ENST00000555611 599 ntTSL 4 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 LINC02314-201ENST00000555725 516 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC010760.1-201ENST00000565129 545 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 RN7SL457P-201ENST00000578760 287 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC004253.2-201ENST00000585025 397 ntTSL 3 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC8.17□□□□□ -1.1
USB1Q9BQ65 AC011712.1-201ENST00000588959 234 ntBASIC8.17□□□□□ -1.1
USB1Q9BQ65 DYNLL1P3-201ENST00000596113 266 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms