Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 LINC01808-203ENST00000641932 1643 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AL451064.2-201ENST00000623514 1654 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 SNX18P3-202ENST00000565670 1750 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 RNA5SP188-201ENST00000362916 129 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 RNU12-2P-201ENST00000364789 156 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 SNORA30B-201ENST00000365319 129 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 GAPDHP69-201ENST00000425504 1008 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 RPL21P33-201ENST00000444831 484 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 RPLP0P1-201ENST00000457002 361 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 H3F3AP3-201ENST00000497682 407 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 BOLA2P1-201ENST00000584794 232 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AL031777.2-201ENST00000611953 196 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 RN7SL126P-201ENST00000616400 299 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AP003486.1-201ENST00000525716 3994 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 AC137056.2-201ENST00000624055 1958 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 TATDN2P3-201ENST00000452855 3665 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.89□□□□□ -1.47
CPNE2Q96FN4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CPNE2Q96FN4 CDY19P-201ENST00000411668 1613 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 CDY18P-201ENST00000438294 1609 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 BRD7P1-201ENST00000557705 1915 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 U3.14-201ENST00000365363 227 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AL451142.1-201ENST00000375867 775 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC090114.1-201ENST00000393266 448 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 RN7SKP188-201ENST00000410789 317 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC023141.1-201ENST00000419418 379 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 CHCHD3P1-201ENST00000425516 676 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 CT45A11P-201ENST00000448043 1134 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC002075.1-201ENST00000457396 676 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 RN7SL145P-201ENST00000469955 296 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC117383.2-201ENST00000514722 322 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 SCARNA18.2-201ENST00000516882 84 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 IGLC4-201ENST00000517690 248 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 MIR5705-201ENST00000579870 89 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC067852.5-201ENST00000589299 310 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC137695.1-201ENST00000604126 489 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC245407.2-201ENST00000614199 451 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 AC005618.1-201ENST00000606901 3148 ntBASIC5.88□□□□□ -1.47
CPNE2Q96FN4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CPNE2Q96FN4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms