Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AP001000.1-201ENST00000526843 742 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC118273.2-201ENST00000532092 465 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 OR8L1P-201ENST00000534005 955 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC048344.2-201ENST00000547280 147 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 SNRPCP20-201ENST00000588011 210 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AP005229.1-201ENST00000592198 810 ntTSL 3 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC022146.1-201ENST00000595307 847 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 VN1R90P-201ENST00000595717 726 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 DUXAP11-201ENST00000603858 526 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC007684.1-201ENST00000609671 477 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AL121757.2-201ENST00000611223 313 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 Metazoa_SRP.136-201ENST00000614846 283 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AL355480.4-201ENST00000626823 69 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC104964.2-201ENST00000562242 4641 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 PARP15-201ENST00000310366 1518 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 MTCO1P28-201ENST00000574177 1528 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC027279.4-201ENST00000624371 2072 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC007614.2-201ENST00000569877 1851 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 Y_RNA.61-201ENST00000362835 102 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 RNA5SP336-201ENST00000364189 117 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 RNU6-481P-201ENST00000384194 107 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 U3.28-201ENST00000391249 210 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ANXA2P3-201ENST00000404883 1008 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ARF1P1-201ENST00000406466 544 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 EEF1A1P39-201ENST00000440791 250 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC243962.1-201ENST00000441512 579 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 WASF1P1-201ENST00000447560 1131 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 MRPL35P4-201ENST00000453682 566 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 RN7SL280P-201ENST00000496490 288 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 MTND6P20-201ENST00000522986 418 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 OR7E10P-201ENST00000526420 991 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AL121766.1-201ENST00000547436 487 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC084757.1-201ENST00000559987 490 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC093249.5-201ENST00000568120 430 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC138761.2-201ENST00000583878 343 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 APOC2-202ENST00000585786 880 ntTSL 2 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 APOC2-204ENST00000591597 447 ntTSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 OR7A1P-201ENST00000601206 970 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AL121655.1-201ENST00000605811 308 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC024060.1-201ENST00000607052 494 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 BX649601.1-201ENST00000608264 572 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AL034428.1-202ENST00000613736 625 ntTSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AC026368.1-201ENST00000614934 690 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 AF246928.1-201ENST00000623768 87 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 LYG2-206ENST00000626374 650 ntTSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 MTND1P37-201ENST00000636562 264 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 OR8A1-204ENST00000642111 1145 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 HSPD1P9-201ENST00000420325 1636 ntBASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms