Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AC112492.2-201ENST00000432774 1030 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 PTMAP1-205ENST00000455552 325 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AC023194.2-201ENST00000465398 406 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AC068860.1-201ENST00000623701 3736 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 MAPK10-357ENST00000641831 2858 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AL359694.1-201ENST00000403247 604 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AP005202.1-201ENST00000489915 867 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 PABPC1P1-201ENST00000506347 591 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 ST13P6-201ENST00000522430 1102 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AC097467.4-201ENST00000605504 141 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 AC104184.1-201ENST00000607513 721 ntBASIC6.56□□□□□ -1.36
RIF1Q5UIP0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RIF1Q5UIP0 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AC105342.1-201ENST00000378334 6848 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 MIR1272-201ENST00000408106 129 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AC244452.1-201ENST00000413798 141 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 RPL36P1-201ENST00000419720 225 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 RPL23AP28-201ENST00000448062 470 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 RN7SKP238-201ENST00000516483 249 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 SUMO2P15-201ENST00000604285 278 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AC006924.1-201ENST00000610750 559 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 MIR6810-201ENST00000622701 70 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 SNORA16A-202ENST00000628458 135 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 METTL2B-204ENST00000480046 5743 ntTSL 2 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AC018717.1-201ENST00000457712 1505 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 NLRP9P1-201ENST00000540920 2655 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 ATP5LP2-201ENST00000440646 311 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AL445665.1-202ENST00000452436 324 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 CDH12P4-201ENST00000517835 295 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms