Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 RBMY2YP-201ENST00000423333 912 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 UQCRHP1-204ENST00000424609 274 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 AL034399.1-201ENST00000451535 380 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 PMS2P11-201ENST00000451831 574 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 AC007000.1-201ENST00000453064 794 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 SEPT7P3-201ENST00000455017 621 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 ACTG1P20-201ENST00000486001 468 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 RPS10P20-201ENST00000494130 463 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 AP001124.1-201ENST00000529628 385 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 OR7E96P-201ENST00000530816 976 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CKS1BP61024 ULK4P3-201ENST00000563895 440 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 AC074051.4-201ENST00000564888 892 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 ULK4P1-202ENST00000565174 503 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC4.8□□□□□ -1.64
CKS1BP61024 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC4.8□□□□□ -1.64
CKS1BP61024 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC4.8□□□□□ -1.64
CKS1BP61024 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.8□□□□□ -1.64
CKS1BP61024 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 AC093591.2-201ENST00000565254 3843 ntBASIC4.8□□□□□ -1.64
CKS1BP61024 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.8□□□□□ -1.64
CKS1BP61024 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
CKS1BP61024 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.8□□□□□ -1.64
CKS1BP61024 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC4.8□□□□□ -1.64
CKS1BP61024 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CKS1BP61024 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC4.79□□□□□ -1.64
CKS1BP61024 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 AL022311.1-201ENST00000623726 19416 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.79□□□□□ -1.64
CKS1BP61024 AC092724.1-201ENST00000624623 3397 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CKS1BP61024 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 AC104837.1-201ENST00000444644 1587 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CKS1BP61024 SLC9B1P3-201ENST00000452667 1334 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CKS1BP61024 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CKS1BP61024 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CKS1BP61024 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC4.79□□□□□ -1.64
CKS1BP61024 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 OR9K2-201ENST00000305377 1122 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CKS1BP61024 SNORA73B-201ENST00000363217 204 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 RNU1-16P-201ENST00000365477 164 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC4.79□□□□□ -1.64
CKS1BP61024 TMED5-201ENST00000370280 750 ntTSL 2 BASIC4.79□□□□□ -1.64
CKS1BP61024 AP003170.5-201ENST00000397185 335 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 MIR541-201ENST00000401360 84 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.79□□□□□ -1.64
CKS1BP61024 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC4.79□□□□□ -1.64
CKS1BP61024 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC4.79□□□□□ -1.64
CKS1BP61024 RPL23AP34-201ENST00000423483 410 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 FDPSP1-201ENST00000424976 1071 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 FAF2P1-201ENST00000429974 1298 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.79□□□□□ -1.64
CKS1BP61024 RPS19P6-201ENST00000441327 433 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC4.79□□□□□ -1.64
CKS1BP61024 RPL24P8-201ENST00000446071 474 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 AL135929.1-201ENST00000449287 552 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 HSPA8P3-201ENST00000449300 780 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 RN7SL587P-201ENST00000459853 281 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC4.79□□□□□ -1.64
CKS1BP61024 MORF4L2P1-201ENST00000503761 858 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC4.79□□□□□ -1.64
CKS1BP61024 OR6M3P-201ENST00000531567 700 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC4.79□□□□□ -1.64
CKS1BP61024 AC090115.2-201ENST00000548060 883 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC4.79□□□□□ -1.64
CKS1BP61024 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC4.79□□□□□ -1.64
CKS1BP61024 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms