Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 RN7SKP72-201ENST00000362327 292 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 RN7SKP161-201ENST00000411110 305 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC5.73□□□□□ -1.49
AP3S2P59780 RPL19P21-201ENST00000424919 591 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 FDPSP6-201ENST00000425091 512 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 VNN3-208ENST00000427187 1214 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 Z68868.1-201ENST00000429048 544 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 FDPSP8-201ENST00000438304 1089 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 AC009237.4-201ENST00000441078 238 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 RPSAP24-201ENST00000461543 873 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 RN7SL791P-201ENST00000467868 295 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 RN7SL685P-201ENST00000476271 298 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.73□□□□□ -1.49
AP3S2P59780 AC026700.1-201ENST00000512074 544 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 IGLVV-66-201ENST00000523818 341 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC5.73□□□□□ -1.49
AP3S2P59780 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
AP3S2P59780 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC5.73□□□□□ -1.49
AP3S2P59780 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.73□□□□□ -1.49
AP3S2P59780 AC009171.1-201ENST00000572673 266 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC5.73□□□□□ -1.49
AP3S2P59780 EIF1-207ENST00000591776 797 ntTSL 4 BASIC5.73□□□□□ -1.49
AP3S2P59780 AL136141.1-201ENST00000605780 369 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.73□□□□□ -1.49
AP3S2P59780 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.73□□□□□ -1.49
AP3S2P59780 EIF5P2-201ENST00000618904 1035 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 AP003068.4-201ENST00000623192 802 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 AP000577.1-201ENST00000624366 878 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.73□□□□□ -1.49
AP3S2P59780 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
AP3S2P59780 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
AP3S2P59780 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
AP3S2P59780 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.73□□□□□ -1.49
AP3S2P59780 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 PAX8-AS1-213ENST00000609210 1328 ntTSL 5 BASIC5.73□□□□□ -1.49
AP3S2P59780 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
AP3S2P59780 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.72□□□□□ -1.49
AP3S2P59780 AL451064.2-201ENST00000623514 1654 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
AP3S2P59780 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.72□□□□□ -1.49
AP3S2P59780 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 MEST-203ENST00000378576 2180 ntTSL 5 BASIC5.72□□□□□ -1.49
AP3S2P59780 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
AP3S2P59780 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
AP3S2P59780 RPS26P38-201ENST00000414476 348 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC5.72□□□□□ -1.49
AP3S2P59780 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.72□□□□□ -1.49
AP3S2P59780 AL390879.1-201ENST00000439143 386 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.72□□□□□ -1.49
AP3S2P59780 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC5.72□□□□□ -1.49
AP3S2P59780 AL021939.1-201ENST00000441868 886 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 GPR141-202ENST00000447769 1270 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
AP3S2P59780 VN1R38P-201ENST00000450265 887 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 AC010878.1-201ENST00000456500 1047 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 RPL12P5-201ENST00000475149 392 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 RN7SL549P-201ENST00000478997 282 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC5.72□□□□□ -1.49
AP3S2P59780 NMNAT1P4-201ENST00000505598 840 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC5.72□□□□□ -1.49
AP3S2P59780 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC5.72□□□□□ -1.49
AP3S2P59780 AC087257.2-201ENST00000538759 928 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 AC007537.1-201ENST00000539347 327 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 FAM30C-201ENST00000561158 410 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.72□□□□□ -1.49
AP3S2P59780 AC106785.4-201ENST00000569492 412 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.72□□□□□ -1.49
AP3S2P59780 RN7SL270P-201ENST00000579643 281 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 RN7SL3-201ENST00000610674 299 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 AC023310.4-201ENST00000613130 650 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC5.72□□□□□ -1.49
AP3S2P59780 AC244153.1-201ENST00000617990 702 ntTSL 2 BASIC5.72□□□□□ -1.49
AP3S2P59780 AC005790.1-201ENST00000619774 450 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 AP005212.3-201ENST00000619964 528 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.72□□□□□ -1.49
AP3S2P59780 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC5.72□□□□□ -1.49
AP3S2P59780 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 MFSD8-256ENST00000641949 1640 ntBASIC5.72□□□□□ -1.49
AP3S2P59780 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
AP3S2P59780 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.72□□□□□ -1.49
AP3S2P59780 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms