Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHC1P29353 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 HSPD1P1-201ENST00000503199 1726 ntBASIC6.22□□□□□ -1.41
SHC1P29353 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SHC1P29353 AC093829.1-201ENST00000506662 1618 ntBASIC6.21□□□□□ -1.41
SHC1P29353 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.21□□□□□ -1.41
SHC1P29353 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
SHC1P29353 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SHC1P29353 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
SHC1P29353 WBP11P1-201ENST00000562560 1931 ntBASIC6.21□□□□□ -1.41
SHC1P29353 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 AL359263.1-201ENST00000441188 2796 ntBASIC6.21□□□□□ -1.42
SHC1P29353 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.21□□□□□ -1.42
SHC1P29353 MYL6P3-201ENST00000436904 432 ntBASIC6.21□□□□□ -1.42
SHC1P29353 RPS10P14-201ENST00000440748 502 ntBASIC6.21□□□□□ -1.42
SHC1P29353 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.21□□□□□ -1.42
SHC1P29353 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.21□□□□□ -1.42
SHC1P29353 RPL7AP71-201ENST00000451120 739 ntBASIC6.21□□□□□ -1.42
SHC1P29353 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.21□□□□□ -1.42
SHC1P29353 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.21□□□□□ -1.42
SHC1P29353 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.21□□□□□ -1.42
SHC1P29353 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.21□□□□□ -1.42
SHC1P29353 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.21□□□□□ -1.42
SHC1P29353 IGLC4-201ENST00000517690 248 ntBASIC6.21□□□□□ -1.42
SHC1P29353 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.21□□□□□ -1.42
SHC1P29353 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 AC087575.1-201ENST00000585087 229 ntBASIC6.21□□□□□ -1.42
SHC1P29353 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.21□□□□□ -1.42
SHC1P29353 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
SHC1P29353 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SHC1P29353 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.21□□□□□ -1.42
SHC1P29353 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.21□□□□□ -1.42
SHC1P29353 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.21□□□□□ -1.42
SHC1P29353 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.21□□□□□ -1.42
SHC1P29353 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHC1P29353 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
SHC1P29353 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.2□□□□□ -1.42
SHC1P29353 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.2□□□□□ -1.42
SHC1P29353 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.2□□□□□ -1.42
SHC1P29353 RPSAP60-201ENST00000415403 880 ntBASIC6.2□□□□□ -1.42
SHC1P29353 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.2□□□□□ -1.42
SHC1P29353 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.2□□□□□ -1.42
SHC1P29353 PUDPP2-201ENST00000431423 643 ntBASIC6.2□□□□□ -1.42
SHC1P29353 CHCHD4P5-201ENST00000436684 427 ntBASIC6.2□□□□□ -1.42
SHC1P29353 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.2□□□□□ -1.42
SHC1P29353 AL354714.5-201ENST00000450131 590 ntBASIC6.2□□□□□ -1.42
SHC1P29353 AC009244.1-201ENST00000450566 258 ntBASIC6.2□□□□□ -1.42
SHC1P29353 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.2□□□□□ -1.42
SHC1P29353 UOX-201ENST00000471089 899 ntBASIC6.2□□□□□ -1.42
SHC1P29353 AC063943.2-201ENST00000495697 534 ntBASIC6.2□□□□□ -1.42
SHC1P29353 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.2□□□□□ -1.42
SHC1P29353 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.2□□□□□ -1.42
SHC1P29353 SCARNA11.1-201ENST00000516918 132 ntBASIC6.2□□□□□ -1.42
SHC1P29353 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.2□□□□□ -1.42
SHC1P29353 AC021820.1-201ENST00000525564 808 ntBASIC6.2□□□□□ -1.42
SHC1P29353 AP006587.5-201ENST00000532033 739 ntBASIC6.2□□□□□ -1.42
SHC1P29353 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.2□□□□□ -1.42
SHC1P29353 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.2□□□□□ -1.42
SHC1P29353 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.2□□□□□ -1.42
SHC1P29353 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.2□□□□□ -1.42
SHC1P29353 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.2□□□□□ -1.42
SHC1P29353 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SHC1P29353 SNORA70D-201ENST00000578836 135 ntBASIC6.2□□□□□ -1.42
SHC1P29353 AC020914.7-201ENST00000594477 545 ntBASIC6.2□□□□□ -1.42
SHC1P29353 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.2□□□□□ -1.42
SHC1P29353 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 MIR6883-201ENST00000614952 78 ntBASIC6.2□□□□□ -1.42
SHC1P29353 AC131009.3-201ENST00000621809 287 ntBASIC6.2□□□□□ -1.42
SHC1P29353 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.2□□□□□ -1.42
SHC1P29353 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SHC1P29353 BRD7P1-201ENST00000557705 1915 ntBASIC6.2□□□□□ -1.42
SHC1P29353 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHC1P29353 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SHC1P29353 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms