Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DMBP28068 SSXP3-201ENST00000442971 1300 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC119674.1-204ENST00000641348 1343 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 AC005034.3-201ENST00000604845 1747 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 TNPO1P2-201ENST00000426249 2665 ntBASIC5.2□□□□□ -1.58
HLA-DMBP28068 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 SNX18P3-202ENST00000565670 1750 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC090774.4-201ENST00000578888 1372 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC083806.2-201ENST00000617795 2685 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 RPS3AP5-201ENST00000389400 821 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 MIR541-201ENST00000401360 84 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 SOD1P1-201ENST00000407803 440 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 RN7SKP137-201ENST00000411074 307 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC024937.2-201ENST00000411669 1242 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 OR52N3P-201ENST00000413417 934 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AL662791.3-201ENST00000413771 776 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 EIF4A1P2-201ENST00000422633 1220 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC018804.1-201ENST00000430381 618 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 PHB2P1-201ENST00000434943 890 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 MRPS21P3-201ENST00000436696 262 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 OSTCP2-201ENST00000437956 444 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AL592114.2-201ENST00000440142 532 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 RPL29P7-201ENST00000440227 457 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 RPS10P14-201ENST00000440748 502 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC021220.1-201ENST00000507445 630 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 RNA5SP518-201ENST00000515957 119 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 IGLVV-66-201ENST00000523818 341 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 OR7E161P-201ENST00000533722 967 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 PDCL3P1-201ENST00000534575 734 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC007537.1-201ENST00000539347 327 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 EIF4A3P1-201ENST00000578499 647 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 FCGR1CP-201ENST00000579737 1127 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 CTSLP2-201ENST00000580501 394 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 AL352984.2-201ENST00000611153 546 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AL031777.2-201ENST00000611953 196 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 MIR6774-201ENST00000614651 70 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 AL354718.1-201ENST00000619764 589 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC120057.5-201ENST00000623840 154 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HLA-DMBP28068 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 MARK2P4-201ENST00000503381 2380 ntBASIC5.19□□□□□ -1.58
HLA-DMBP28068 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.19□□□□□ -1.58
HLA-DMBP28068 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMBP28068 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMBP28068 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMBP28068 AL031123.3-201ENST00000623345 1837 ntBASIC5.18□□□□□ -1.58
HLA-DMBP28068 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DMBP28068 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMBP28068 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DMBP28068 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMBP28068 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DMBP28068 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DMBP28068 AC089998.1-201ENST00000548575 3141 ntBASIC5.18□□□□□ -1.58
HLA-DMBP28068 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMBP28068 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DMBP28068 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMBP28068 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DMBP28068 RNA5SP65-201ENST00000363166 119 ntBASIC5.18□□□□□ -1.58
HLA-DMBP28068 RN7SKP55-201ENST00000364888 307 ntBASIC5.18□□□□□ -1.58
HLA-DMBP28068 MIR138-2-201ENST00000384916 84 ntBASIC5.18□□□□□ -1.58
HLA-DMBP28068 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DMBP28068 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms