Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DMAP28067 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DMAP28067 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DMAP28067 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 SNORA38B-201ENST00000363524 131 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 RN7SKP47-201ENST00000365347 328 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 RPL12P1-201ENST00000374520 498 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 RN7SKP85-201ENST00000411349 318 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DMAP28067 AL606804.1-202ENST00000446347 481 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 MGAT2P1-201ENST00000449718 797 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 AC093799.1-201ENST00000452411 499 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 RPL34P34-201ENST00000465389 354 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 RN7SL685P-201ENST00000476271 298 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 AC114786.3-201ENST00000509304 705 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 AC114801.1-201ENST00000512633 297 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 IGHV3-57-201ENST00000520143 280 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 OR52K3P-201ENST00000531655 943 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 AP000619.2-201ENST00000546014 969 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 MIR4470-201ENST00000583453 72 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DMAP28067 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DMAP28067 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DMAP28067 AL356361.1-201ENST00000400943 1459 ntBASIC5.81□□□□□ -1.48
HLA-DMAP28067 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DMAP28067 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DMAP28067 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DMAP28067 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 EEF1A1P20-201ENST00000514852 1386 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AP002512.4-202ENST00000641599 4530 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DMAP28067 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DMAP28067 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DMAP28067 RNU1-38P-201ENST00000362817 144 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 RNA5SP483-201ENST00000363431 118 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DMAP28067 TMED5-201ENST00000370280 750 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 RNA5SP297-201ENST00000391029 113 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC017104.2-201ENST00000417000 321 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 OR5P4P-201ENST00000424698 917 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 CYP2C56P-201ENST00000440076 291 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 CRYGGP-201ENST00000443337 145 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC013429.1-201ENST00000456604 422 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC087257.2-201ENST00000538759 928 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 FAM30C-201ENST00000561158 410 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 AP001267.4-201ENST00000602598 545 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 AP001554.1-201ENST00000604533 376 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC005393.1-201ENST00000617916 584 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 AL354718.1-201ENST00000619764 589 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 AL109924.4-201ENST00000623089 670 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 AC087516.1-201ENST00000561236 2428 ntBASIC5.8□□□□□ -1.48
HLA-DMAP28067 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 CREM-218ENST00000460270 1416 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DMAP28067 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DMAP28067 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
HLA-DMAP28067 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms