Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MYL6P3-201ENST00000436904 432 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AC009518.3-201ENST00000438972 253 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 ST13P21-201ENST00000453250 1098 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 SCDP1-201ENST00000455244 1081 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 RPL10P7-201ENST00000495649 625 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AC073648.3-201ENST00000504939 925 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 RN7SL131P-201ENST00000579043 256 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 MIR5682-201ENST00000584864 76 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AL035410.2-201ENST00000604963 864 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AC245407.2-201ENST00000614199 451 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AL354718.1-201ENST00000619764 589 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AP003108.4-201ENST00000623917 878 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 SNX18P10-201ENST00000625014 519 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AC020658.2-201ENST00000559030 4020 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 ATP5BP1-201ENST00000411980 1574 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AC007485.2-201ENST00000623493 1667 ntBASIC7.02□□□□□ -1.29
PCDH9Q9HC56 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
PCDH9Q9HC56 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AL391261.1-201ENST00000555712 1479 ntBASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 RN7SKP188-201ENST00000410789 317 ntBASIC7.01□□□□□ -1.29
PCDH9Q9HC56 NPM1P36-201ENST00000415681 835 ntBASIC7.01□□□□□ -1.29
PCDH9Q9HC56 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AC027124.1-201ENST00000440852 466 ntBASIC7.01□□□□□ -1.29
PCDH9Q9HC56 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AC133965.1-201ENST00000452984 354 ntBASIC7.01□□□□□ -1.29
PCDH9Q9HC56 RN7SL187P-201ENST00000495587 303 ntBASIC7.01□□□□□ -1.29
PCDH9Q9HC56 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 IGLC4-201ENST00000517690 248 ntBASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AC020914.7-201ENST00000594477 545 ntBASIC7.01□□□□□ -1.29
PCDH9Q9HC56 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AL683813.2-201ENST00000605245 502 ntBASIC7.01□□□□□ -1.29
PCDH9Q9HC56 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDH9Q9HC56 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7□□□□□ -1.29
PCDH9Q9HC56 AC241584.2-201ENST00000637142 2090 ntBASIC7□□□□□ -1.29
PCDH9Q9HC56 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7□□□□□ -1.29
PCDH9Q9HC56 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH9Q9HC56 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
PCDH9Q9HC56 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH9Q9HC56 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH9Q9HC56 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH9Q9HC56 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH9Q9HC56 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDH9Q9HC56 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH9Q9HC56 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDH9Q9HC56 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH9Q9HC56 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7□□□□□ -1.29
PCDH9Q9HC56 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDH9Q9HC56 AC074375.1-201ENST00000372993 192 ntBASIC7□□□□□ -1.29
PCDH9Q9HC56 PPIAP26-201ENST00000377951 522 ntBASIC7□□□□□ -1.29
PCDH9Q9HC56 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7□□□□□ -1.29
PCDH9Q9HC56 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms