Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL356583.2-201ENST00000426536 280 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AL121776.1-201ENST00000429337 372 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC114492.1-201ENST00000434936 454 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AL513122.2-201ENST00000437135 838 ntTSL 3 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC012363.2-201ENST00000437837 555 ntTSL 4 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 ZEB1-AS1-203ENST00000441257 585 ntTSL 2 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 SMPD4P1-203ENST00000443839 2108 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USB1Q9BQ65 SPRYD7P1-201ENST00000443861 570 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 RPL31P15-201ENST00000449770 338 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC087312.1-201ENST00000471411 480 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC130651.1-201ENST00000482912 598 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 ABCA11P-202ENST00000504019 2110 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC146949.1-201ENST00000505946 423 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 EGFLAM-207ENST00000506135 889 ntTSL 3 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC146944.1-201ENST00000508439 418 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 OR10J9P-201ENST00000511932 987 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 RN7SKP31-201ENST00000516354 278 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 PIGFP1-201ENST00000519180 653 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC023232.1-201ENST00000524963 285 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC084121.2-201ENST00000528788 264 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 SAA1-203ENST00000532858 583 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC008770.2-201ENST00000547473 542 ntAPPRIS P1 TSL 4 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 AL160314.2-201ENST00000554857 662 ntTSL 4 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 GTF2IP8-201ENST00000560687 584 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 TMEM170A-204ENST00000567796 734 ntTSL 5 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC093330.1-204ENST00000582763 396 ntTSL 5 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC022149.1-201ENST00000596032 609 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC007785.1-201ENST00000597989 332 ntTSL 5 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 C1orf186-209ENST00000603488 727 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 MARK3P1-201ENST00000604796 643 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 C5orf67-202ENST00000611197 354 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 Z97987.1-201ENST00000618051 433 ntTSL 3 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 SMCR2_1.1-201ENST00000621493 157 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC006840.1-201ENST00000623069 542 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC007342.8-201ENST00000623278 678 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 AL589666.2-201ENST00000624603 618 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USB1Q9BQ65 RACGAP1-201ENST00000312377 3073 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USB1Q9BQ65 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USB1Q9BQ65 LINC02181-201ENST00000430050 4083 ntTSL 2 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USB1Q9BQ65 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USB1Q9BQ65 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USB1Q9BQ65 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC020604.1-201ENST00000622979 1909 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
USB1Q9BQ65 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
USB1Q9BQ65 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC8.19□□□□□ -1.1
USB1Q9BQ65 AC020978.8-201ENST00000571975 3022 ntBASIC8.19□□□□□ -1.1
USB1Q9BQ65 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 MOV10L1-205ENST00000395858 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 INTS4-206ENST00000529807 1845 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC131649.2-201ENST00000624925 4439 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 Y_RNA.72-201ENST00000362894 103 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 Y_RNA.409-201ENST00000383990 98 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 RNU6-767P-201ENST00000384132 107 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 SNORA7.3-201ENST00000384186 139 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 RPS3AP36-201ENST00000398190 775 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 YWHAZP6-201ENST00000399764 738 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC073263.1-202ENST00000401851 924 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AL512422.1-201ENST00000407033 553 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC109780.2-201ENST00000413467 845 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC004987.3-201ENST00000413879 771 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC092580.2-201ENST00000414654 469 ntTSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 ZFY-AS1-201ENST00000417305 500 ntTSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 B3GALNT1P1-201ENST00000420569 975 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AL589935.1-204ENST00000423255 407 ntTSL 3 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC073188.2-201ENST00000424036 701 ntTSL 5 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 MYO5BP3-201ENST00000431872 1279 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 HMGB1P45-201ENST00000435986 653 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 TAAR7P-201ENST00000436141 242 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AL162584.1-201ENST00000437097 633 ntTSL 3 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 YWHAQP9-201ENST00000445891 512 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 PRDX2P1-201ENST00000450181 589 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 HNRNPCP10-201ENST00000457130 884 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC8.18□□□□□ -1.1
USB1Q9BQ65 FTH1P4-201ENST00000480365 553 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 RN7SL845P-201ENST00000484385 290 ntBASIC8.18□□□□□ -1.1
USB1Q9BQ65 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms