Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 RNU1-46P-201ENST00000384425 164 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 RNA5SP18-201ENST00000390935 121 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 RNA5SP297-201ENST00000391029 113 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 RN7SKP148-201ENST00000410179 275 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 MGAT2P1-201ENST00000449718 797 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 RPS18P13-201ENST00000461260 454 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 RN7SL392P-201ENST00000473024 299 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 RN7SL379P-201ENST00000479912 293 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC079944.1-201ENST00000485426 495 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 RN7SL306P-201ENST00000492941 296 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC026700.1-201ENST00000512074 544 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 IGKV2-19-201ENST00000518132 283 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AL353608.4-201ENST00000624487 1188 ntBASIC6.26□□□□□ -1.41
LPCAT4Q643R3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.26□□□□□ -1.41
LPCAT4Q643R3 SLC9B1P3-201ENST00000452667 1334 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 RNU1-38P-201ENST00000362817 144 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 MSRB1P1-201ENST00000396851 354 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 VN1R33P-201ENST00000411800 887 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AL606752.1-201ENST00000435442 666 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 FDPSP8-201ENST00000438304 1089 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 CICP10-201ENST00000439497 198 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 PABPC1P10-201ENST00000464731 381 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AC114801.1-201ENST00000512633 297 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 PHBP2-201ENST00000532859 806 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AC079866.1-201ENST00000534985 1220 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AL157899.1-201ENST00000604110 936 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AL353898.2-201ENST00000623000 255 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 AC079456.1-201ENST00000624010 480 ntBASIC6.25□□□□□ -1.41
LPCAT4Q643R3 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
LPCAT4Q643R3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LPCAT4Q643R3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LPCAT4Q643R3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
LPCAT4Q643R3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LPCAT4Q643R3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
LPCAT4Q643R3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms