Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 POT1-202ENST00000393329 3950 ntTSL 5 BASIC4.67□□□□□ -1.66
RPL39P62891 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
RPL39P62891 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RPL39P62891 OR5E1P-201ENST00000305754 927 ntBASIC4.67□□□□□ -1.66
RPL39P62891 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 SNORD8-201ENST00000363915 110 ntBASIC4.67□□□□□ -1.66
RPL39P62891 RN7SKP55-201ENST00000364888 307 ntBASIC4.67□□□□□ -1.66
RPL39P62891 RNA5SP442-201ENST00000365050 107 ntBASIC4.67□□□□□ -1.66
RPL39P62891 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RPL39P62891 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
RPL39P62891 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 RPL31-202ENST00000409000 641 ntTSL 2 BASIC4.67□□□□□ -1.66
RPL39P62891 AL157698.1-201ENST00000415190 1011 ntBASIC4.67□□□□□ -1.66
RPL39P62891 RPL23AP18-201ENST00000416139 468 ntBASIC4.67□□□□□ -1.66
RPL39P62891 RPS17P17-201ENST00000419392 409 ntBASIC4.67□□□□□ -1.66
RPL39P62891 RPSAP59-201ENST00000421048 890 ntBASIC4.67□□□□□ -1.66
RPL39P62891 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC4.67□□□□□ -1.66
RPL39P62891 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
RPL39P62891 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC4.67□□□□□ -1.66
RPL39P62891 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC4.67□□□□□ -1.66
RPL39P62891 NMNAT1P3-201ENST00000457517 888 ntBASIC4.67□□□□□ -1.66
RPL39P62891 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC4.67□□□□□ -1.66
RPL39P62891 RN7SL165P-201ENST00000477476 291 ntBASIC4.67□□□□□ -1.66
RPL39P62891 NACAP6-201ENST00000509572 622 ntBASIC4.67□□□□□ -1.66
RPL39P62891 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC4.67□□□□□ -1.66
RPL39P62891 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC4.67□□□□□ -1.66
RPL39P62891 AP001804.1-201ENST00000526868 919 ntBASIC4.67□□□□□ -1.66
RPL39P62891 NQO1-205ENST00000561500 891 ntTSL 3 BASIC4.67□□□□□ -1.66
RPL39P62891 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC4.67□□□□□ -1.66
RPL39P62891 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC4.67□□□□□ -1.66
RPL39P62891 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC4.67□□□□□ -1.66
RPL39P62891 AL132821.1-201ENST00000616029 394 ntBASIC4.67□□□□□ -1.66
RPL39P62891 AL161420.1-201ENST00000619393 264 ntBASIC4.67□□□□□ -1.66
RPL39P62891 AL669830.1-201ENST00000621457 656 ntBASIC4.67□□□□□ -1.66
RPL39P62891 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
RPL39P62891 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 CUBNP3-201ENST00000457461 1784 ntBASIC4.67□□□□□ -1.66
RPL39P62891 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RPL39P62891 AC110716.2-201ENST00000563865 3945 ntBASIC4.67□□□□□ -1.66
RPL39P62891 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
RPL39P62891 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC4.67□□□□□ -1.66
RPL39P62891 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RPL39P62891 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC4.67□□□□□ -1.66
RPL39P62891 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC4.66□□□□□ -1.66
RPL39P62891 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 FUNDC2P3-201ENST00000334716 533 ntBASIC4.66□□□□□ -1.66
RPL39P62891 SNORA70.3-201ENST00000365075 132 ntBASIC4.66□□□□□ -1.66
RPL39P62891 AL360271.1-201ENST00000395679 510 ntBASIC4.66□□□□□ -1.66
RPL39P62891 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC4.66□□□□□ -1.66
RPL39P62891 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 Z68868.1-201ENST00000429048 544 ntBASIC4.66□□□□□ -1.66
RPL39P62891 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC4.66□□□□□ -1.66
RPL39P62891 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC4.66□□□□□ -1.66
RPL39P62891 GOT2P2-201ENST00000450663 1251 ntBASIC4.66□□□□□ -1.66
RPL39P62891 CCNJP2-201ENST00000457810 1163 ntBASIC4.66□□□□□ -1.66
RPL39P62891 RPS26P11-201ENST00000463445 348 ntBASIC4.66□□□□□ -1.66
RPL39P62891 RN7SL213P-201ENST00000463482 317 ntBASIC4.66□□□□□ -1.66
RPL39P62891 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC4.66□□□□□ -1.66
RPL39P62891 RPS2P25-201ENST00000467247 580 ntBASIC4.66□□□□□ -1.66
RPL39P62891 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC4.66□□□□□ -1.66
RPL39P62891 RN7SL239P-201ENST00000490061 300 ntBASIC4.66□□□□□ -1.66
RPL39P62891 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC4.66□□□□□ -1.66
RPL39P62891 RNA5SP518-201ENST00000515957 119 ntBASIC4.66□□□□□ -1.66
RPL39P62891 AC100854.1-201ENST00000520351 341 ntBASIC4.66□□□□□ -1.66
RPL39P62891 IGLVI-70-201ENST00000523272 390 ntBASIC4.66□□□□□ -1.66
RPL39P62891 IGHV1-14-201ENST00000523391 241 ntBASIC4.66□□□□□ -1.66
RPL39P62891 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC4.66□□□□□ -1.66
RPL39P62891 OR4A6P-201ENST00000534364 970 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms