Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AP3S2P59780 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.75□□□□□ -1.49
AP3S2P59780 AC211433.3-201ENST00000623770 375 ntBASIC5.75□□□□□ -1.49
AP3S2P59780 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.75□□□□□ -1.49
AP3S2P59780 AC016582.3-206ENST00000636547 207 ntBASIC5.75□□□□□ -1.49
AP3S2P59780 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC5.75□□□□□ -1.49
AP3S2P59780 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
AP3S2P59780 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.75□□□□□ -1.49
AP3S2P59780 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AP3S2P59780 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AP3S2P59780 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
AP3S2P59780 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
AP3S2P59780 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.75□□□□□ -1.49
AP3S2P59780 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
AP3S2P59780 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
AP3S2P59780 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
AP3S2P59780 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
AP3S2P59780 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
AP3S2P59780 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.74□□□□□ -1.49
AP3S2P59780 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.74□□□□□ -1.49
AP3S2P59780 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
AP3S2P59780 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
AP3S2P59780 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 AL049697.3-201ENST00000406493 982 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 AL023284.3-201ENST00000407767 334 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 AC021876.1-201ENST00000425959 359 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 GAPDHP75-201ENST00000433910 943 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.74□□□□□ -1.49
AP3S2P59780 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC5.74□□□□□ -1.49
AP3S2P59780 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC5.74□□□□□ -1.49
AP3S2P59780 RN7SL775P-201ENST00000498361 336 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 AC073648.1-201ENST00000508957 930 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 GAPDHP31-201ENST00000509325 1014 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 OR7E85P-201ENST00000512164 985 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 IGKV2-19-201ENST00000518132 283 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 PHBP2-201ENST00000532859 806 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.74□□□□□ -1.49
AP3S2P59780 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.74□□□□□ -1.49
AP3S2P59780 HNRNPCP1-201ENST00000556181 766 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.74□□□□□ -1.49
AP3S2P59780 AC092133.1-201ENST00000565828 719 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 AP003115.1-201ENST00000569849 463 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.74□□□□□ -1.49
AP3S2P59780 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 AC024589.2-201ENST00000605642 1294 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 AC025171.4-201ENST00000607250 1047 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 AL136304.1-201ENST00000607790 509 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 AL031658.2-201ENST00000616850 651 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 AL353898.2-201ENST00000623000 255 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 AC068205.4-201ENST00000637880 804 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 AC010624.4-201ENST00000597606 1351 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.74□□□□□ -1.49
AP3S2P59780 GTF2IP4-201ENST00000453092 2054 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 LINC01616-201ENST00000561816 2280 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.74□□□□□ -1.49
AP3S2P59780 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.74□□□□□ -1.49
AP3S2P59780 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
AP3S2P59780 AL512353.3-201ENST00000417517 1326 ntBASIC5.74□□□□□ -1.49
AP3S2P59780 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.73□□□□□ -1.49
AP3S2P59780 AL359263.1-201ENST00000441188 2796 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.73□□□□□ -1.49
AP3S2P59780 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
AP3S2P59780 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.73□□□□□ -1.49
AP3S2P59780 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.73□□□□□ -1.49
AP3S2P59780 CASC19-228ENST00000641414 1684 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
AP3S2P59780 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.73□□□□□ -1.49
AP3S2P59780 AL356361.1-201ENST00000400943 1459 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 MSL3P1-202ENST00000440028 1468 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 AC093844.1-201ENST00000514910 1361 ntBASIC5.73□□□□□ -1.49
AP3S2P59780 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.73□□□□□ -1.49
AP3S2P59780 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
AP3S2P59780 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.73□□□□□ -1.49
AP3S2P59780 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms