Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL592114.2-201ENST00000440142 532 ntBASIC7.29□□□□□ -1.24
NEK3P51956 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.29□□□□□ -1.24
NEK3P51956 TAAR4P-201ENST00000454843 1039 ntBASIC7.29□□□□□ -1.24
NEK3P51956 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.29□□□□□ -1.24
NEK3P51956 MYL6P4-201ENST00000477911 453 ntBASIC7.29□□□□□ -1.24
NEK3P51956 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC7.29□□□□□ -1.24
NEK3P51956 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.29□□□□□ -1.24
NEK3P51956 NACAP6-201ENST00000509572 622 ntBASIC7.29□□□□□ -1.24
NEK3P51956 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.29□□□□□ -1.24
NEK3P51956 NPM1P21-201ENST00000513394 762 ntBASIC7.29□□□□□ -1.24
NEK3P51956 RN7SKP233-201ENST00000517005 110 ntBASIC7.29□□□□□ -1.24
NEK3P51956 AP002981.1-201ENST00000517692 975 ntBASIC7.29□□□□□ -1.24
NEK3P51956 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC7.29□□□□□ -1.24
NEK3P51956 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC7.29□□□□□ -1.24
NEK3P51956 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.29□□□□□ -1.24
NEK3P51956 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.29□□□□□ -1.24
NEK3P51956 ULK4P1-202ENST00000565174 503 ntBASIC7.29□□□□□ -1.24
NEK3P51956 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC7.29□□□□□ -1.24
NEK3P51956 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC7.29□□□□□ -1.24
NEK3P51956 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.29□□□□□ -1.24
NEK3P51956 MIR8082-201ENST00000612488 81 ntBASIC7.29□□□□□ -1.24
NEK3P51956 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.29□□□□□ -1.24
NEK3P51956 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.29□□□□□ -1.24
NEK3P51956 AC091544.5-201ENST00000620192 3815 ntBASIC7.29□□□□□ -1.24
NEK3P51956 AC117503.3-201ENST00000623811 601 ntBASIC7.29□□□□□ -1.24
NEK3P51956 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
NEK3P51956 AC090771.1-201ENST00000585803 1618 ntBASIC7.29□□□□□ -1.24
NEK3P51956 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.29□□□□□ -1.24
NEK3P51956 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 AC127070.3-201ENST00000503695 3263 ntBASIC7.29□□□□□ -1.24
NEK3P51956 AC007993.1-201ENST00000621298 2430 ntBASIC7.29□□□□□ -1.24
NEK3P51956 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
NEK3P51956 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.28□□□□□ -1.24
NEK3P51956 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.28□□□□□ -1.24
NEK3P51956 AC004014.2-201ENST00000623718 5122 ntBASIC7.28□□□□□ -1.24
NEK3P51956 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.28□□□□□ -1.24
NEK3P51956 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.28□□□□□ -1.24
NEK3P51956 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
NEK3P51956 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
NEK3P51956 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
NEK3P51956 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC7.28□□□□□ -1.24
NEK3P51956 MIR138-2-201ENST00000384916 84 ntBASIC7.28□□□□□ -1.24
NEK3P51956 RNU6-316P-201ENST00000391027 107 ntBASIC7.28□□□□□ -1.24
NEK3P51956 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.28□□□□□ -1.24
NEK3P51956 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
NEK3P51956 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 AC091390.2-201ENST00000432573 374 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AC009237.4-201ENST00000441078 238 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.28□□□□□ -1.24
NEK3P51956 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.28□□□□□ -1.24
NEK3P51956 AC104997.1-201ENST00000519761 717 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 AC005000.1-201ENST00000536192 288 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AC090971.3-201ENST00000557871 1041 ntBASIC7.28□□□□□ -1.24
NEK3P51956 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 AC244034.2-201ENST00000562504 509 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AC126323.4-201ENST00000566935 234 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.28□□□□□ -1.24
NEK3P51956 MIR4470-201ENST00000583453 72 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.28□□□□□ -1.24
NEK3P51956 AC092960.1-201ENST00000604762 351 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC7.28□□□□□ -1.24
NEK3P51956 MIR6883-201ENST00000614952 78 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AC003001.2-201ENST00000616294 831 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AC016542.3-201ENST00000623520 619 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.28□□□□□ -1.24
NEK3P51956 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.28□□□□□ -1.24
NEK3P51956 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.28□□□□□ -1.24
NEK3P51956 CFTRP2-201ENST00000634304 199 ntBASIC7.28□□□□□ -1.24
NEK3P51956 AC091948.2-201ENST00000636510 279 ntBASIC7.28□□□□□ -1.24
NEK3P51956 UG0898H09-202ENST00000623646 7040 ntBASIC7.28□□□□□ -1.24
NEK3P51956 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.28□□□□□ -1.24
NEK3P51956 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NEK3P51956 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
NEK3P51956 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms