Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RNA5SP362-201ENST00000516048 118 ntBASIC11.66□□□□□ -0.54
SMARCA4P51532 PTTG3P-201ENST00000521862 606 ntBASIC11.66□□□□□ -0.54
SMARCA4P51532 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMARCA4P51532 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC11.66□□□□□ -0.54
SMARCA4P51532 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC11.66□□□□□ -0.54
SMARCA4P51532 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC11.66□□□□□ -0.54
SMARCA4P51532 BUB1P1-201ENST00000603541 607 ntBASIC11.66□□□□□ -0.54
SMARCA4P51532 AC009237.12-201ENST00000604755 742 ntBASIC11.66□□□□□ -0.54
SMARCA4P51532 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMARCA4P51532 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMARCA4P51532 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMARCA4P51532 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
SMARCA4P51532 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SMARCA4P51532 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SMARCA4P51532 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC11.66□□□□□ -0.54
SMARCA4P51532 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SMARCA4P51532 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMARCA4P51532 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC11.65□□□□□ -0.54
SMARCA4P51532 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SMARCA4P51532 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SMARCA4P51532 THADA-202ENST00000402360 2974 ntTSL 5 BASIC11.65□□□□□ -0.54
SMARCA4P51532 ZSCAN12P1-201ENST00000406489 419 ntBASIC11.65□□□□□ -0.54
SMARCA4P51532 AC023141.9-201ENST00000458734 412 ntBASIC11.65□□□□□ -0.54
SMARCA4P51532 AC011476.1-201ENST00000466725 307 ntBASIC11.65□□□□□ -0.54
SMARCA4P51532 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC11.65□□□□□ -0.54
SMARCA4P51532 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC11.65□□□□□ -0.54
SMARCA4P51532 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC11.65□□□□□ -0.54
SMARCA4P51532 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC11.65□□□□□ -0.54
SMARCA4P51532 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC11.65□□□□□ -0.54
SMARCA4P51532 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMARCA4P51532 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SMARCA4P51532 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SMARCA4P51532 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SMARCA4P51532 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SMARCA4P51532 PHF2P2-202ENST00000444553 2865 ntBASIC11.65□□□□□ -0.54
SMARCA4P51532 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC11.65□□□□□ -0.54
SMARCA4P51532 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC11.65□□□□□ -0.54
SMARCA4P51532 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC11.65□□□□□ -0.54
SMARCA4P51532 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMARCA4P51532 AL359694.2-201ENST00000567753 1615 ntBASIC11.65□□□□□ -0.54
SMARCA4P51532 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
SMARCA4P51532 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC11.65□□□□□ -0.55
SMARCA4P51532 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMARCA4P51532 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMARCA4P51532 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC11.64□□□□□ -0.55
SMARCA4P51532 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SMARCA4P51532 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC11.64□□□□□ -0.55
SMARCA4P51532 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC11.64□□□□□ -0.55
SMARCA4P51532 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC11.64□□□□□ -0.55
SMARCA4P51532 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC11.64□□□□□ -0.55
SMARCA4P51532 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC11.64□□□□□ -0.55
SMARCA4P51532 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC11.64□□□□□ -0.55
SMARCA4P51532 MIR3176-201ENST00000582210 90 ntBASIC11.64□□□□□ -0.55
SMARCA4P51532 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC11.64□□□□□ -0.55
SMARCA4P51532 AC129778.1-202ENST00000623812 261 ntBASIC11.64□□□□□ -0.55
SMARCA4P51532 AL591379.1-207ENST00000635982 261 ntBASIC11.64□□□□□ -0.55
SMARCA4P51532 AMYH02020865.1-205ENST00000636189 261 ntBASIC11.64□□□□□ -0.55
SMARCA4P51532 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC11.64□□□□□ -0.55
SMARCA4P51532 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC11.64□□□□□ -0.55
SMARCA4P51532 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC11.64□□□□□ -0.55
SMARCA4P51532 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMARCA4P51532 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMARCA4P51532 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMARCA4P51532 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMARCA4P51532 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SMARCA4P51532 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC11.64□□□□□ -0.55
SMARCA4P51532 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC11.64□□□□□ -0.55
SMARCA4P51532 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC11.64□□□□□ -0.55
SMARCA4P51532 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMARCA4P51532 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMARCA4P51532 PSMC1P2-201ENST00000423961 1204 ntBASIC11.64□□□□□ -0.55
SMARCA4P51532 OR3D1P-201ENST00000438288 955 ntBASIC11.64□□□□□ -0.55
SMARCA4P51532 RPS4XP14-201ENST00000493072 781 ntBASIC11.64□□□□□ -0.55
SMARCA4P51532 MTND6P8-201ENST00000503471 522 ntBASIC11.64□□□□□ -0.55
SMARCA4P51532 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC11.64□□□□□ -0.55
SMARCA4P51532 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMARCA4P51532 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC11.64□□□□□ -0.55
SMARCA4P51532 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC11.64□□□□□ -0.55
SMARCA4P51532 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMARCA4P51532 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC11.64□□□□□ -0.55
SMARCA4P51532 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC11.64□□□□□ -0.55
SMARCA4P51532 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
SMARCA4P51532 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC11.64□□□□□ -0.55
SMARCA4P51532 OR8B9P-202ENST00000642028 5216 ntBASIC11.63□□□□□ -0.55
SMARCA4P51532 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMARCA4P51532 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC11.63□□□□□ -0.55
SMARCA4P51532 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMARCA4P51532 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMARCA4P51532 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC11.63□□□□□ -0.55
SMARCA4P51532 CASC19-238ENST00000641523 1558 ntBASIC11.63□□□□□ -0.55
SMARCA4P51532 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
SMARCA4P51532 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC11.63□□□□□ -0.55
SMARCA4P51532 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMARCA4P51532 AL096711.1-201ENST00000404780 554 ntBASIC11.63□□□□□ -0.55
SMARCA4P51532 RPL7AP14-201ENST00000424041 802 ntBASIC11.63□□□□□ -0.55
SMARCA4P51532 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms