Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MIR4509-2-201ENST00000583920 94 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC8.44□□□□□ -1.06
LIG1P18858 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LIG1P18858 RPP40P2-201ENST00000603596 712 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AL021918.1-201ENST00000603933 236 ntBASIC8.44□□□□□ -1.06
LIG1P18858 KATNBL1P5-201ENST00000605015 517 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.44□□□□□ -1.06
LIG1P18858 AL136985.2-201ENST00000607372 535 ntBASIC8.44□□□□□ -1.06
LIG1P18858 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LIG1P18858 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
LIG1P18858 MIR4509-1-201ENST00000618224 94 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
LIG1P18858 AC005383.1-201ENST00000622689 534 ntBASIC8.44□□□□□ -1.06
LIG1P18858 AP002791.1-201ENST00000623291 381 ntBASIC8.44□□□□□ -1.06
LIG1P18858 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.44□□□□□ -1.06
LIG1P18858 AL590396.4-201ENST00000636779 956 ntBASIC8.44□□□□□ -1.06
LIG1P18858 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC8.44□□□□□ -1.06
LIG1P18858 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.44□□□□□ -1.06
LIG1P18858 AC132219.2-201ENST00000624416 2327 ntBASIC8.44□□□□□ -1.06
LIG1P18858 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.44□□□□□ -1.06
LIG1P18858 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LIG1P18858 AP003471.1-202ENST00000319051 1988 ntBASIC8.44□□□□□ -1.06
LIG1P18858 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LIG1P18858 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC8.44□□□□□ -1.06
LIG1P18858 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC8.44□□□□□ -1.06
LIG1P18858 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC8.44□□□□□ -1.06
LIG1P18858 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LIG1P18858 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LIG1P18858 PCF11-AS1-201ENST00000602322 1516 ntBASIC8.44□□□□□ -1.06
LIG1P18858 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
LIG1P18858 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
LIG1P18858 AL133243.4-201ENST00000623116 3109 ntBASIC8.43□□□□□ -1.06
LIG1P18858 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
LIG1P18858 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 SNORA51.7-201ENST00000384171 134 ntBASIC8.43□□□□□ -1.06
LIG1P18858 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
LIG1P18858 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC8.43□□□□□ -1.06
LIG1P18858 AL049545.1-201ENST00000401856 572 ntBASIC8.43□□□□□ -1.06
LIG1P18858 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
LIG1P18858 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 AC017019.1-201ENST00000426129 261 ntBASIC8.43□□□□□ -1.06
LIG1P18858 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
LIG1P18858 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC8.43□□□□□ -1.06
LIG1P18858 AC073143.1-201ENST00000436316 395 ntBASIC8.43□□□□□ -1.06
LIG1P18858 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
LIG1P18858 RN7SL55P-201ENST00000464534 297 ntBASIC8.43□□□□□ -1.06
LIG1P18858 AC104982.1-201ENST00000478775 574 ntBASIC8.43□□□□□ -1.06
LIG1P18858 RN7SL563P-201ENST00000481233 298 ntBASIC8.43□□□□□ -1.06
LIG1P18858 RN7SL635P-201ENST00000492123 296 ntBASIC8.43□□□□□ -1.06
LIG1P18858 RN7SL869P-201ENST00000497032 300 ntBASIC8.43□□□□□ -1.06
LIG1P18858 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC8.43□□□□□ -1.06
LIG1P18858 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC8.43□□□□□ -1.06
LIG1P18858 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC8.43□□□□□ -1.06
LIG1P18858 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC8.43□□□□□ -1.06
LIG1P18858 AC021451.1-201ENST00000523498 1129 ntBASIC8.43□□□□□ -1.06
LIG1P18858 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC8.43□□□□□ -1.06
LIG1P18858 VDAC2P2-201ENST00000544463 901 ntBASIC8.43□□□□□ -1.06
LIG1P18858 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC8.43□□□□□ -1.06
LIG1P18858 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC8.43□□□□□ -1.06
LIG1P18858 EIF4EBP2P2-201ENST00000563883 333 ntBASIC8.43□□□□□ -1.06
LIG1P18858 MIR5705-201ENST00000579870 89 ntBASIC8.43□□□□□ -1.06
LIG1P18858 AC069431.2-201ENST00000604149 1099 ntBASIC8.43□□□□□ -1.06
LIG1P18858 MIR6736-201ENST00000616799 59 ntBASIC8.43□□□□□ -1.06
LIG1P18858 AC026585.1-201ENST00000619582 524 ntBASIC8.43□□□□□ -1.06
LIG1P18858 AC098679.4-201ENST00000624241 654 ntBASIC8.43□□□□□ -1.06
LIG1P18858 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC8.43□□□□□ -1.06
LIG1P18858 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC8.43□□□□□ -1.06
LIG1P18858 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC8.43□□□□□ -1.06
LIG1P18858 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 THAP12P3-201ENST00000456373 2266 ntBASIC8.43□□□□□ -1.06
LIG1P18858 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
LIG1P18858 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
LIG1P18858 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC8.43□□□□□ -1.06
LIG1P18858 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
LIG1P18858 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LIG1P18858 AC107980.1-201ENST00000558671 3355 ntBASIC8.42□□□□□ -1.06
LIG1P18858 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LIG1P18858 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
LIG1P18858 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
LIG1P18858 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LIG1P18858 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
LIG1P18858 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LIG1P18858 RNU4-39P-201ENST00000362455 127 ntBASIC8.42□□□□□ -1.06
LIG1P18858 RNA5SP218-201ENST00000363188 109 ntBASIC8.42□□□□□ -1.06
LIG1P18858 RN7SKP77-201ENST00000363261 353 ntBASIC8.42□□□□□ -1.06
LIG1P18858 RNU6-670P-201ENST00000364312 104 ntBASIC8.42□□□□□ -1.06
LIG1P18858 NRIR-201ENST00000366140 799 ntTSL 3 BASIC8.42□□□□□ -1.06
LIG1P18858 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC8.42□□□□□ -1.06
LIG1P18858 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
LIG1P18858 RGS5-202ENST00000367903 934 ntTSL 3 BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms