Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC092375.1-201ENST00000550410 637 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 OR5BK1P-201ENST00000550421 823 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.55□□□□□ -1.52
CCL3L1P16619 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC5.55□□□□□ -1.52
CCL3L1P16619 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC5.55□□□□□ -1.52
CCL3L1P16619 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.55□□□□□ -1.52
CCL3L1P16619 AC004232.1-201ENST00000571388 208 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 AC068408.1-201ENST00000577406 1144 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.55□□□□□ -1.52
CCL3L1P16619 RPS4XP21-201ENST00000603814 750 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 DIMT1P1-201ENST00000603970 763 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCL3L1P16619 AC010333.3-201ENST00000615100 402 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 AC127071.2-201ENST00000623293 527 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.55□□□□□ -1.52
CCL3L1P16619 AL596244.1-201ENST00000567068 3779 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCL3L1P16619 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CCL3L1P16619 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC5.55□□□□□ -1.52
CCL3L1P16619 AC125603.4-201ENST00000621942 2699 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 RBMY1A3P-201ENST00000382670 1404 ntBASIC5.55□□□□□ -1.52
CCL3L1P16619 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CCL3L1P16619 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCL3L1P16619 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCL3L1P16619 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCL3L1P16619 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.55□□□□□ -1.52
CCL3L1P16619 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCL3L1P16619 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCL3L1P16619 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.55□□□□□ -1.52
CCL3L1P16619 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.55□□□□□ -1.52
CCL3L1P16619 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 RNA5SP382-201ENST00000363355 112 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 RNU1-24P-201ENST00000364285 165 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 RN7SKP118-201ENST00000364331 330 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CCL3L1P16619 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCL3L1P16619 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCL3L1P16619 UBBP1-201ENST00000392399 473 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 AL359694.1-201ENST00000403247 604 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 RN7SKP205-201ENST00000410999 307 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 PTPN2P1-201ENST00000423212 1072 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 HMGN1P32-201ENST00000441744 256 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.54□□□□□ -1.52
CCL3L1P16619 RN7SKP198-201ENST00000459286 306 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 RN7SL70P-201ENST00000478322 302 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 RN7SL37P-201ENST00000490461 307 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 RN7SL350P-201ENST00000492591 299 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.54□□□□□ -1.52
CCL3L1P16619 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.54□□□□□ -1.52
CCL3L1P16619 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.54□□□□□ -1.52
CCL3L1P16619 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.54□□□□□ -1.52
CCL3L1P16619 AC007068.2-201ENST00000543168 395 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.54□□□□□ -1.52
CCL3L1P16619 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.54□□□□□ -1.52
CCL3L1P16619 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 AC012065.3-201ENST00000602736 439 ntBASIC5.54□□□□□ -1.52
CCL3L1P16619 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.54□□□□□ -1.52
CCL3L1P16619 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
CCL3L1P16619 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCL3L1P16619 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC5.54□□□□□ -1.52
CCL3L1P16619 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC5.54□□□□□ -1.52
CCL3L1P16619 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CCL3L1P16619 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCL3L1P16619 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC5.53□□□□□ -1.52
CCL3L1P16619 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.53□□□□□ -1.52
CCL3L1P16619 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.53□□□□□ -1.52
CCL3L1P16619 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.53□□□□□ -1.52
CCL3L1P16619 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCL3L1P16619 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCL3L1P16619 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCL3L1P16619 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.53□□□□□ -1.52
CCL3L1P16619 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCL3L1P16619 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.53□□□□□ -1.52
CCL3L1P16619 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.53□□□□□ -1.52
CCL3L1P16619 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CCL3L1P16619 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCL3L1P16619 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms